Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2226 and Dsui_2227 are separated by 33 nucleotides Dsui_2227 and Dsui_2228 are separated by 75 nucleotides Dsui_2228 and Dsui_2229 are separated by 70 nucleotides
Dsui_2226: Dsui_2226 - DNA-binding domain-containing protein, AraC-type, at 2,367,297 to 2,368,181
_2226
Dsui_2227: Dsui_2227 - NADH-quinone oxidoreductase, B subunit, at 2,368,215 to 2,368,736
_2227
Dsui_2228: Dsui_2228 - Zn-dependent alcohol dehydrogenase, at 2,368,812 to 2,369,834
_2228
Dsui_2229: Dsui_2229 - transcriptional regulator, at 2,369,905 to 2,370,780
_2229
Position (kb)
2368
2369
2370 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2367.839 kb on - strand at 2367.840 kb on - strand at 2367.872 kb on - strand at 2368.092 kb on - strand at 2368.123 kb on + strand at 2368.225 kb on + strand at 2368.225 kb on + strand at 2368.284 kb on - strand at 2368.424 kb on - strand, within Dsui_2227 at 2368.508 kb on + strand at 2368.544 kb on + strand at 2368.550 kb on + strand at 2368.563 kb on + strand, within Dsui_2227 at 2368.797 kb on - strand at 2368.797 kb on - strand at 2368.849 kb on + strand at 2368.894 kb on + strand at 2368.894 kb on + strand at 2368.894 kb on + strand at 2368.902 kb on - strand at 2368.902 kb on - strand at 2368.975 kb on - strand, within Dsui_2228 at 2368.992 kb on - strand at 2369.084 kb on - strand at 2369.142 kb on - strand at 2369.142 kb on - strand at 2369.222 kb on + strand at 2369.260 kb on + strand at 2369.299 kb on - strand, within Dsui_2228 at 2369.356 kb on + strand at 2369.356 kb on - strand, within Dsui_2228 at 2369.356 kb on - strand, within Dsui_2228 at 2369.356 kb on - strand, within Dsui_2228 at 2369.357 kb on + strand, within Dsui_2228 at 2369.358 kb on + strand at 2369.358 kb on + strand at 2369.366 kb on - strand, within Dsui_2228 at 2369.374 kb on - strand at 2369.413 kb on + strand at 2369.416 kb on + strand at 2369.477 kb on + strand at 2369.485 kb on - strand at 2369.524 kb on + strand at 2369.606 kb on - strand at 2369.636 kb on + strand at 2369.668 kb on - strand at 2369.736 kb on - strand at 2369.736 kb on - strand at 2369.738 kb on + strand at 2369.738 kb on + strand at 2370.078 kb on + strand at 2370.078 kb on + strand at 2370.110 kb on + strand at 2370.118 kb on - strand, within Dsui_2229 at 2370.118 kb on - strand, within Dsui_2229 at 2370.118 kb on - strand, within Dsui_2229 at 2370.163 kb on - strand, within Dsui_2229 at 2370.168 kb on - strand, within Dsui_2229 at 2370.284 kb on - strand, within Dsui_2229 at 2370.292 kb on - strand at 2370.396 kb on - strand, within Dsui_2229 at 2370.401 kb on - strand, within Dsui_2229 at 2370.484 kb on + strand at 2370.510 kb on - strand, within Dsui_2229 at 2370.515 kb on - strand, within Dsui_2229 at 2370.625 kb on - strand, within Dsui_2229 at 2370.642 kb on - strand, within Dsui_2229 at 2370.672 kb on - strand, within Dsui_2229 at 2370.672 kb on - strand, within Dsui_2229 at 2370.691 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 2,367,839 - +0.5 2,367,840 - +0.5 2,367,872 - -1.1 2,368,092 - +0.5 2,368,123 + -0.5 2,368,225 + -0.5 2,368,225 + -0.5 2,368,284 - +0.5 2,368,424 - Dsui_2227 0.40 +0.5 2,368,508 + +0.5 2,368,544 + +0.5 2,368,550 + +0.5 2,368,563 + Dsui_2227 0.67 -1.5 2,368,797 - -1.1 2,368,797 - -1.5 2,368,849 + -0.5 2,368,894 + +0.5 2,368,894 + +0.5 2,368,894 + -0.5 2,368,902 - +0.5 2,368,902 - -0.5 2,368,975 - Dsui_2228 0.16 -1.5 2,368,992 - +0.5 2,369,084 - +0.5 2,369,142 - +0.5 2,369,142 - +0.5 2,369,222 + +0.5 2,369,260 + -0.5 2,369,299 - Dsui_2228 0.48 -0.5 2,369,356 + -0.5 2,369,356 - Dsui_2228 0.53 +0.5 2,369,356 - Dsui_2228 0.53 -1.5 2,369,356 - Dsui_2228 0.53 -0.5 2,369,357 + Dsui_2228 0.53 -1.8 2,369,358 + -0.5 2,369,358 + -1.8 2,369,366 - Dsui_2228 0.54 -1.5 2,369,374 - +0.5 2,369,413 + +0.5 2,369,416 + -0.5 2,369,477 + +0.5 2,369,485 - +0.5 2,369,524 + -0.5 2,369,606 - -1.1 2,369,636 + +0.5 2,369,668 - +0.5 2,369,736 - +0.5 2,369,736 - +0.5 2,369,738 + -1.1 2,369,738 + -0.5 2,370,078 + +0.5 2,370,078 + +0.5 2,370,110 + +0.5 2,370,118 - Dsui_2229 0.24 +0.1 2,370,118 - Dsui_2229 0.24 +0.0 2,370,118 - Dsui_2229 0.24 +0.7 2,370,163 - Dsui_2229 0.29 -1.8 2,370,168 - Dsui_2229 0.30 -1.2 2,370,284 - Dsui_2229 0.43 -0.8 2,370,292 - +0.5 2,370,396 - Dsui_2229 0.56 +0.1 2,370,401 - Dsui_2229 0.57 -0.5 2,370,484 + -0.5 2,370,510 - Dsui_2229 0.69 -0.2 2,370,515 - Dsui_2229 0.70 -3.6 2,370,625 - Dsui_2229 0.82 -0.5 2,370,642 - Dsui_2229 0.84 -0.5 2,370,672 - Dsui_2229 0.88 -1.5 2,370,672 - Dsui_2229 0.88 +0.0 2,370,691 + -1.1
Or see this region's nucleotide sequence