Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2176 and Dsui_2177 are separated by 89 nucleotides Dsui_2177 and Dsui_2178 are separated by 67 nucleotides Dsui_2178 and Dsui_2179 are separated by 34 nucleotides
Dsui_2176: Dsui_2176 - putative esterase of the alpha-beta hydrolase superfamily, at 2,312,502 to 2,313,542
_2176
Dsui_2177: Dsui_2177 - methyltransferase family protein, at 2,313,632 to 2,314,270
_2177
Dsui_2178: Dsui_2178 - hypothetical protein, at 2,314,338 to 2,315,144
_2178
Dsui_2179: Dsui_2179 - conserved protein of DIM6/NTAB family, at 2,315,179 to 2,315,745
_2179
Position (kb)
2313
2314
2315 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2312.701 kb on - strand at 2312.701 kb on - strand, within Dsui_2176 at 2312.748 kb on + strand, within Dsui_2176 at 2312.774 kb on + strand, within Dsui_2176 at 2312.779 kb on + strand, within Dsui_2176 at 2312.800 kb on + strand, within Dsui_2176 at 2312.936 kb on + strand at 2313.083 kb on + strand, within Dsui_2176 at 2313.213 kb on - strand, within Dsui_2176 at 2313.217 kb on + strand, within Dsui_2176 at 2313.229 kb on + strand, within Dsui_2176 at 2313.351 kb on + strand, within Dsui_2176 at 2313.444 kb on + strand at 2313.493 kb on + strand at 2313.578 kb on + strand at 2313.608 kb on + strand at 2313.663 kb on - strand at 2313.682 kb on - strand at 2313.685 kb on + strand at 2313.713 kb on - strand at 2313.786 kb on + strand, within Dsui_2177 at 2313.904 kb on + strand, within Dsui_2177 at 2313.951 kb on - strand at 2314.012 kb on + strand, within Dsui_2177 at 2314.120 kb on - strand, within Dsui_2177 at 2314.167 kb on + strand at 2314.243 kb on - strand at 2314.371 kb on + strand at 2314.429 kb on + strand, within Dsui_2178 at 2314.523 kb on - strand, within Dsui_2178 at 2314.561 kb on + strand, within Dsui_2178 at 2314.583 kb on + strand, within Dsui_2178 at 2314.826 kb on + strand, within Dsui_2178 at 2314.852 kb on + strand at 2314.857 kb on - strand at 2315.096 kb on + strand at 2315.214 kb on - strand at 2315.254 kb on + strand, within Dsui_2179
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 2,312,701 - +0.6 2,312,701 - Dsui_2176 0.19 +0.6 2,312,748 + Dsui_2176 0.24 -0.4 2,312,774 + Dsui_2176 0.26 -0.4 2,312,779 + Dsui_2176 0.27 -0.4 2,312,800 + Dsui_2176 0.29 -0.4 2,312,936 + -0.4 2,313,083 + Dsui_2176 0.56 -0.4 2,313,213 - Dsui_2176 0.68 -2.2 2,313,217 + Dsui_2176 0.69 -0.4 2,313,229 + Dsui_2176 0.70 +0.6 2,313,351 + Dsui_2176 0.82 +0.6 2,313,444 + -1.0 2,313,493 + +0.6 2,313,578 + -1.0 2,313,608 + +1.2 2,313,663 - -0.4 2,313,682 - -0.4 2,313,685 + -1.5 2,313,713 - +0.6 2,313,786 + Dsui_2177 0.24 +1.5 2,313,904 + Dsui_2177 0.43 -0.4 2,313,951 - +0.6 2,314,012 + Dsui_2177 0.59 -0.2 2,314,120 - Dsui_2177 0.76 -1.0 2,314,167 + +2.2 2,314,243 - +0.6 2,314,371 + +0.3 2,314,429 + Dsui_2178 0.11 +1.0 2,314,523 - Dsui_2178 0.23 -1.9 2,314,561 + Dsui_2178 0.28 -1.8 2,314,583 + Dsui_2178 0.30 -0.4 2,314,826 + Dsui_2178 0.60 -0.2 2,314,852 + -0.4 2,314,857 - -0.4 2,315,096 + -0.9 2,315,214 - -2.4 2,315,254 + Dsui_2179 0.13 -1.7
Or see this region's nucleotide sequence