Strain Fitness in Dechlorosoma suillum PS around Dsui_2115
Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Bacitracin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,239,692 | + | +0.6 | |||
2,240,165 | + | Dsui_2114 | 0.87 | -0.4 | |
2,240,173 | - | +0.6 | |||
2,240,309 | - | -0.4 | |||
2,240,491 | - | -1.4 | |||
2,240,770 | + | Dsui_2115 | 0.27 | -2.2 | |
2,240,817 | - | Dsui_2115 | 0.31 | -0.4 | |
2,240,829 | - | Dsui_2115 | 0.33 | +0.6 | |
2,240,963 | - | Dsui_2115 | 0.47 | -0.4 | |
2,240,963 | - | Dsui_2115 | 0.47 | -1.0 | |
2,241,200 | - | Dsui_2115 | 0.72 | -2.2 | |
2,241,248 | + | Dsui_2115 | 0.77 | +0.6 | |
2,241,404 | + | -1.4 | |||
2,241,582 | + | +0.6 | |||
2,241,592 | + | -0.4 | |||
2,241,627 | + | -0.4 | |||
2,241,635 | - | -1.4 | |||
2,241,635 | - | -0.4 | |||
2,241,761 | - | -0.4 | |||
2,241,763 | + | Dsui_2116 | 0.13 | +0.6 | |
2,241,794 | - | +0.6 | |||
2,241,884 | - | Dsui_2116 | 0.24 | -1.0 | |
2,241,884 | - | Dsui_2116 | 0.24 | -1.0 | |
2,241,905 | + | +0.6 | |||
2,242,053 | + | +0.6 | |||
2,242,133 | - | Dsui_2116 | 0.46 | -2.4 | |
2,242,330 | + | Dsui_2116 | 0.63 | -1.7 | |
2,242,377 | + | Dsui_2116 | 0.67 | +0.6 | |
2,242,406 | + | +0.6 |
Or see this region's nucleotide sequence