Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2085 and Dsui_2086 are separated by 226 nucleotides Dsui_2086 and Dsui_2087 are separated by 202 nucleotides Dsui_2087 and Dsui_2088 are separated by 36 nucleotides
Dsui_2085: Dsui_2085 - NADPH-dependent FMN reductase, at 2,205,698 to 2,207,074
_2085
Dsui_2086: Dsui_2086 - cytochrome c, at 2,207,301 to 2,209,391
_2086
Dsui_2087: Dsui_2087 - cytochrome c553, at 2,209,594 to 2,210,328
_2087
Dsui_2088: Dsui_2088 - cytochrome c, at 2,210,365 to 2,211,318
_2088
Position (kb)
2207
2208
2209
2210 Strain fitness (log2 ratio)
-2
-1
0
1 at 2206.358 kb on - strand at 2206.554 kb on - strand at 2206.577 kb on - strand, within Dsui_2085 at 2206.668 kb on - strand at 2206.670 kb on - strand at 2206.787 kb on - strand at 2206.867 kb on + strand at 2207.257 kb on + strand at 2207.257 kb on + strand at 2207.257 kb on + strand at 2207.257 kb on + strand at 2207.257 kb on + strand at 2207.265 kb on - strand at 2207.279 kb on + strand at 2207.600 kb on + strand at 2207.659 kb on + strand, within Dsui_2086 at 2207.670 kb on + strand at 2207.675 kb on + strand at 2207.675 kb on + strand at 2207.678 kb on - strand, within Dsui_2086 at 2207.786 kb on - strand at 2207.817 kb on - strand at 2207.848 kb on - strand at 2207.849 kb on + strand at 2207.937 kb on + strand, within Dsui_2086 at 2208.039 kb on - strand, within Dsui_2086 at 2208.077 kb on + strand, within Dsui_2086 at 2208.085 kb on - strand at 2208.137 kb on + strand at 2208.200 kb on + strand, within Dsui_2086 at 2208.200 kb on + strand at 2208.400 kb on + strand at 2208.457 kb on + strand, within Dsui_2086 at 2208.499 kb on + strand at 2208.673 kb on - strand at 2208.679 kb on - strand at 2208.908 kb on + strand, within Dsui_2086 at 2209.069 kb on + strand at 2209.087 kb on - strand at 2209.187 kb on + strand at 2209.196 kb on - strand at 2209.268 kb on - strand at 2209.288 kb on + strand at 2209.592 kb on - strand at 2209.722 kb on - strand at 2209.908 kb on + strand at 2209.908 kb on + strand at 2209.908 kb on + strand at 2209.959 kb on + strand at 2210.143 kb on + strand, within Dsui_2087 at 2210.225 kb on + strand at 2210.247 kb on + strand, within Dsui_2087 at 2210.255 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 2,206,358 - -1.4 2,206,554 - -1.7 2,206,577 - Dsui_2085 0.64 -0.6 2,206,668 - +0.6 2,206,670 - -1.4 2,206,787 - -1.0 2,206,867 + +0.6 2,207,257 + -1.4 2,207,257 + -0.4 2,207,257 + -0.4 2,207,257 + +0.6 2,207,257 + -0.4 2,207,265 - +0.6 2,207,279 + -0.9 2,207,600 + +0.6 2,207,659 + Dsui_2086 0.17 +0.6 2,207,670 + -0.4 2,207,675 + +0.6 2,207,675 + +0.6 2,207,678 - Dsui_2086 0.18 -1.4 2,207,786 - -1.4 2,207,817 - +0.6 2,207,848 - -0.4 2,207,849 + +0.6 2,207,937 + Dsui_2086 0.30 -1.7 2,208,039 - Dsui_2086 0.35 -0.4 2,208,077 + Dsui_2086 0.37 -0.4 2,208,085 - -1.0 2,208,137 + +0.6 2,208,200 + Dsui_2086 0.43 +0.6 2,208,200 + +0.6 2,208,400 + +0.6 2,208,457 + Dsui_2086 0.55 -2.7 2,208,499 + +0.6 2,208,673 - +0.6 2,208,679 - -1.4 2,208,908 + Dsui_2086 0.77 -1.0 2,209,069 + -0.4 2,209,087 - +0.6 2,209,187 + +0.6 2,209,196 - +0.6 2,209,268 - +0.6 2,209,288 + -1.0 2,209,592 - -0.4 2,209,722 - -0.4 2,209,908 + -2.0 2,209,908 + -1.0 2,209,908 + -2.0 2,209,959 + +0.6 2,210,143 + Dsui_2087 0.75 -0.4 2,210,225 + +0.6 2,210,247 + Dsui_2087 0.89 -0.4 2,210,255 - +0.6
Or see this region's nucleotide sequence