Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2063 and Dsui_2064 are separated by 135 nucleotides Dsui_2064 and Dsui_2065 are separated by 46 nucleotides Dsui_2065 and Dsui_2066 are separated by 256 nucleotides
Dsui_2063: Dsui_2063 - protein chain release factor B, at 2,182,123 to 2,182,521
_2063
Dsui_2064: Dsui_2064 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 2,182,657 to 2,183,466
_2064
Dsui_2065: Dsui_2065 - hypothetical protein, contains double-stranded beta-helix domain, at 2,183,513 to 2,184,088
_2065
Dsui_2066: Dsui_2066 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 2,184,345 to 2,185,148
_2066
Position (kb)
2183
2184
2185 Strain fitness (log2 ratio)
-2
-1
0
1 at 2182.516 kb on + strand at 2182.516 kb on + strand at 2182.523 kb on + strand at 2182.567 kb on - strand at 2182.636 kb on - strand at 2182.759 kb on - strand, within Dsui_2064 at 2182.792 kb on - strand, within Dsui_2064 at 2182.847 kb on - strand, within Dsui_2064 at 2182.847 kb on - strand, within Dsui_2064 at 2182.901 kb on - strand, within Dsui_2064 at 2182.909 kb on - strand, within Dsui_2064 at 2182.976 kb on + strand, within Dsui_2064 at 2183.011 kb on - strand, within Dsui_2064 at 2183.060 kb on + strand at 2183.070 kb on + strand, within Dsui_2064 at 2183.166 kb on + strand at 2183.167 kb on + strand at 2183.175 kb on + strand at 2183.255 kb on - strand, within Dsui_2064 at 2183.255 kb on - strand, within Dsui_2064 at 2183.339 kb on - strand, within Dsui_2064 at 2183.411 kb on + strand at 2183.421 kb on + strand at 2183.488 kb on + strand at 2183.506 kb on - strand at 2183.559 kb on - strand at 2183.619 kb on + strand, within Dsui_2065 at 2183.640 kb on - strand at 2183.640 kb on - strand, within Dsui_2065 at 2183.657 kb on - strand, within Dsui_2065 at 2183.779 kb on - strand, within Dsui_2065 at 2183.794 kb on - strand, within Dsui_2065 at 2183.795 kb on - strand, within Dsui_2065 at 2183.863 kb on - strand, within Dsui_2065 at 2183.890 kb on + strand, within Dsui_2065 at 2183.952 kb on - strand, within Dsui_2065 at 2184.012 kb on - strand, within Dsui_2065 at 2184.068 kb on + strand at 2184.095 kb on + strand at 2184.101 kb on - strand at 2184.244 kb on + strand at 2184.254 kb on - strand at 2184.288 kb on - strand at 2184.445 kb on + strand, within Dsui_2066 at 2184.527 kb on + strand, within Dsui_2066 at 2184.527 kb on + strand at 2184.607 kb on + strand, within Dsui_2066 at 2184.693 kb on - strand, within Dsui_2066 at 2184.737 kb on + strand, within Dsui_2066 at 2184.766 kb on - strand, within Dsui_2066 at 2184.792 kb on - strand, within Dsui_2066 at 2184.926 kb on - strand, within Dsui_2066 at 2184.933 kb on - strand, within Dsui_2066 at 2185.019 kb on + strand, within Dsui_2066 at 2185.026 kb on - strand, within Dsui_2066
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 2,182,516 + -0.4 2,182,516 + -1.7 2,182,523 + -1.7 2,182,567 - +0.6 2,182,636 - +0.6 2,182,759 - Dsui_2064 0.13 +0.6 2,182,792 - Dsui_2064 0.17 +0.6 2,182,847 - Dsui_2064 0.23 +0.6 2,182,847 - Dsui_2064 0.23 +0.6 2,182,901 - Dsui_2064 0.30 -1.4 2,182,909 - Dsui_2064 0.31 -2.2 2,182,976 + Dsui_2064 0.39 +0.6 2,183,011 - Dsui_2064 0.44 +1.6 2,183,060 + -0.4 2,183,070 + Dsui_2064 0.51 -2.2 2,183,166 + -0.4 2,183,167 + -1.0 2,183,175 + +0.6 2,183,255 - Dsui_2064 0.74 -0.4 2,183,255 - Dsui_2064 0.74 +0.6 2,183,339 - Dsui_2064 0.84 -0.4 2,183,411 + -1.0 2,183,421 + +0.6 2,183,488 + +0.6 2,183,506 - +0.6 2,183,559 - +0.0 2,183,619 + Dsui_2065 0.18 -1.0 2,183,640 - +0.6 2,183,640 - Dsui_2065 0.22 -0.1 2,183,657 - Dsui_2065 0.25 +1.0 2,183,779 - Dsui_2065 0.46 -0.7 2,183,794 - Dsui_2065 0.49 +1.6 2,183,795 - Dsui_2065 0.49 -0.4 2,183,863 - Dsui_2065 0.61 -2.1 2,183,890 + Dsui_2065 0.65 -0.4 2,183,952 - Dsui_2065 0.76 -0.4 2,184,012 - Dsui_2065 0.87 +0.6 2,184,068 + +0.6 2,184,095 + -2.2 2,184,101 - +0.6 2,184,244 + -2.4 2,184,254 - +0.6 2,184,288 - -0.4 2,184,445 + Dsui_2066 0.12 -1.0 2,184,527 + Dsui_2066 0.23 -1.4 2,184,527 + +0.6 2,184,607 + Dsui_2066 0.33 -0.4 2,184,693 - Dsui_2066 0.43 -0.5 2,184,737 + Dsui_2066 0.49 -0.4 2,184,766 - Dsui_2066 0.52 +0.1 2,184,792 - Dsui_2066 0.56 -0.1 2,184,926 - Dsui_2066 0.72 +0.3 2,184,933 - Dsui_2066 0.73 +0.3 2,185,019 + Dsui_2066 0.84 -1.0 2,185,026 - Dsui_2066 0.85 +0.2
Or see this region's nucleotide sequence