Strain Fitness in Dechlorosoma suillum PS around Dsui_1957
Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Bacitracin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,067,176 | + | Dsui_1955 | 0.47 | -0.0 | |
2,067,176 | + | Dsui_1955 | 0.47 | -1.4 | |
2,067,327 | + | Dsui_1955 | 0.66 | -0.8 | |
2,067,351 | + | Dsui_1955 | 0.69 | -0.9 | |
2,067,432 | + | Dsui_1955 | 0.80 | -1.2 | |
2,067,437 | + | Dsui_1955 | 0.80 | -2.6 | |
2,067,444 | + | Dsui_1955 | 0.81 | -1.6 | |
2,067,476 | - | Dsui_1955 | 0.85 | -0.2 | |
2,067,643 | + | Dsui_1956 | 0.12 | +0.2 | |
2,067,651 | - | +0.8 | |||
2,067,651 | - | Dsui_1956 | 0.14 | +0.8 | |
2,067,682 | + | Dsui_1956 | 0.20 | +0.4 | |
2,067,715 | + | Dsui_1956 | 0.28 | +0.4 | |
2,067,723 | + | Dsui_1956 | 0.30 | +0.5 | |
2,067,768 | - | Dsui_1956 | 0.40 | +0.8 | |
2,067,811 | + | Dsui_1956 | 0.50 | +0.6 | |
2,067,821 | + | Dsui_1956 | 0.52 | +0.3 | |
2,067,821 | + | Dsui_1956 | 0.52 | +0.5 | |
2,067,829 | - | Dsui_1956 | 0.54 | -0.8 | |
2,067,829 | - | Dsui_1956 | 0.54 | -1.8 | |
2,067,929 | + | Dsui_1956 | 0.76 | +0.4 | |
2,067,937 | - | Dsui_1956 | 0.78 | -0.8 | |
2,068,012 | - | -0.8 | |||
2,068,066 | + | +0.4 | |||
2,068,074 | - | +0.8 | |||
2,068,074 | - | -2.4 | |||
2,068,074 | - | -0.2 | |||
2,068,207 | + | +0.6 | |||
2,068,209 | + | +0.5 | |||
2,068,253 | + | +0.6 | |||
2,068,325 | + | -0.7 |
Or see this region's nucleotide sequence