Strain Fitness in Dechlorosoma suillum PS around Dsui_1005
Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Bacitracin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,032,384 | + | +0.2 | |||
1,032,394 | - | -0.1 | |||
1,032,630 | + | -1.2 | |||
1,032,710 | + | Dsui_1004 | 0.18 | -0.4 | |
1,032,849 | + | Dsui_1004 | 0.44 | +0.2 | |
1,032,884 | - | -1.4 | |||
1,032,928 | - | +0.2 | |||
1,033,006 | - | +0.2 | |||
1,033,174 | + | -0.4 | |||
1,033,257 | + | Dsui_1005 | 0.12 | -0.3 | |
1,033,269 | + | Dsui_1005 | 0.28 | -0.1 | |
1,033,277 | - | +0.2 | |||
1,033,284 | + | Dsui_1005 | 0.49 | -0.0 | |
1,033,349 | - | -2.4 | |||
1,033,403 | - | +0.0 | |||
1,033,413 | - | -2.0 | |||
1,033,712 | - | Dsui_1006 | 0.38 | -0.7 | |
1,033,737 | - | Dsui_1006 | 0.41 | -0.8 | |
1,033,758 | - | Dsui_1006 | 0.43 | +0.4 | |
1,033,845 | + | Dsui_1006 | 0.52 | -1.8 | |
1,033,884 | + | Dsui_1006 | 0.57 | -2.6 | |
1,033,908 | - | Dsui_1006 | 0.59 | -1.0 | |
1,033,985 | + | Dsui_1006 | 0.68 | -2.1 | |
1,033,990 | + | +0.2 | |||
1,034,149 | - | Dsui_1006 | 0.85 | -0.3 | |
1,034,159 | + | Dsui_1006 | 0.87 | +0.2 | |
1,034,166 | - | Dsui_1006 | 0.87 | -0.6 | |
1,034,179 | + | +0.2 | |||
1,034,253 | - | -0.4 |
Or see this region's nucleotide sequence