Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0637 and Dsui_0638 overlap by 4 nucleotides Dsui_0638 and Dsui_0639 are separated by 107 nucleotides Dsui_0639 and Dsui_0640 are separated by 182 nucleotides
Dsui_0637: Dsui_0637 - amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family, at 631,201 to 631,875
_0637
Dsui_0638: Dsui_0638 - ABC-type polar amino acid transport system, ATPase component, at 631,872 to 632,600
_0638
Dsui_0639: Dsui_0639 - hypothetical protein, at 632,708 to 632,929
_0639
Dsui_0640: Dsui_0640 - 5,10-methylenetetrahydrofolate reductase, at 633,112 to 633,951
_0640
Position (kb) 632
633 Strain fitness (log2 ratio) -1
0
1 at 631.917 kb on - strand at 631.941 kb on - strand at 631.962 kb on - strand, within Dsui_0638 at 631.990 kb on + strand, within Dsui_0638 at 631.998 kb on - strand, within Dsui_0638 at 632.000 kb on + strand, within Dsui_0638 at 632.026 kb on + strand, within Dsui_0638 at 632.104 kb on - strand, within Dsui_0638 at 632.177 kb on + strand, within Dsui_0638 at 632.177 kb on + strand, within Dsui_0638 at 632.184 kb on + strand, within Dsui_0638 at 632.185 kb on - strand, within Dsui_0638 at 632.185 kb on - strand, within Dsui_0638 at 632.209 kb on - strand, within Dsui_0638 at 632.214 kb on + strand, within Dsui_0638 at 632.221 kb on + strand, within Dsui_0638 at 632.386 kb on + strand, within Dsui_0638 at 632.594 kb on + strand at 632.594 kb on + strand at 632.594 kb on + strand at 632.602 kb on - strand at 632.692 kb on - strand at 632.737 kb on - strand, within Dsui_0639 at 632.744 kb on + strand, within Dsui_0639 at 632.747 kb on - strand, within Dsui_0639 at 632.888 kb on + strand, within Dsui_0639 at 632.935 kb on - strand at 632.983 kb on - strand at 633.062 kb on + strand at 633.062 kb on + strand at 633.062 kb on + strand at 633.070 kb on - strand at 633.070 kb on - strand at 633.070 kb on - strand at 633.077 kb on - strand at 633.118 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 631,917 - +0.1 631,941 - +0.7 631,962 - Dsui_0638 0.12 -0.9 631,990 + Dsui_0638 0.16 -0.0 631,998 - Dsui_0638 0.17 +0.1 632,000 + Dsui_0638 0.18 -0.1 632,026 + Dsui_0638 0.21 -0.7 632,104 - Dsui_0638 0.32 +0.1 632,177 + Dsui_0638 0.42 +0.2 632,177 + Dsui_0638 0.42 -0.2 632,184 + Dsui_0638 0.43 -0.4 632,185 - Dsui_0638 0.43 -0.9 632,185 - Dsui_0638 0.43 +0.4 632,209 - Dsui_0638 0.46 -0.7 632,214 + Dsui_0638 0.47 -0.2 632,221 + Dsui_0638 0.48 -0.6 632,386 + Dsui_0638 0.71 -0.3 632,594 + -0.5 632,594 + -0.2 632,594 + +0.1 632,602 - -0.5 632,692 - +0.1 632,737 - Dsui_0639 0.13 -0.2 632,744 + Dsui_0639 0.16 -1.7 632,747 - Dsui_0639 0.18 +0.0 632,888 + Dsui_0639 0.81 +0.1 632,935 - -0.1 632,983 - -0.2 633,062 + -0.6 633,062 + -1.3 633,062 + -0.2 633,070 - +0.0 633,070 - +0.0 633,070 - -0.1 633,077 - -0.2 633,118 - -0.1
Or see this region's nucleotide sequence