Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0440 and Dsui_0441 are separated by 79 nucleotides Dsui_0441 and Dsui_0442 are separated by 159 nucleotides Dsui_0442 and Dsui_0443 are separated by 6 nucleotides
Dsui_0440: Dsui_0440 - HDOD domain-containing protein, at 447,073 to 447,930
_0440
Dsui_0441: Dsui_0441 - Mg2+ transporter MgtE, at 448,010 to 449,452
_0441
Dsui_0442: Dsui_0442 - monofunctional biosynthetic peptidoglycan transglycosylase, at 449,612 to 450,304
_0442
Dsui_0443: Dsui_0443 - shikimate 5-dehydrogenase, at 450,311 to 451,126
_0443
Position (kb) 448
449
450 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 447.027 kb on + strand at 447.027 kb on + strand at 447.035 kb on - strand at 447.134 kb on + strand at 447.142 kb on - strand at 447.142 kb on - strand at 447.151 kb on + strand at 447.156 kb on + strand at 447.225 kb on - strand, within Dsui_0440 at 447.290 kb on - strand, within Dsui_0440 at 447.296 kb on + strand, within Dsui_0440 at 447.304 kb on - strand at 447.309 kb on - strand, within Dsui_0440 at 447.336 kb on - strand, within Dsui_0440 at 447.339 kb on + strand, within Dsui_0440 at 447.386 kb on + strand, within Dsui_0440 at 447.393 kb on - strand, within Dsui_0440 at 447.442 kb on + strand, within Dsui_0440 at 447.475 kb on + strand, within Dsui_0440 at 447.475 kb on + strand, within Dsui_0440 at 447.569 kb on + strand, within Dsui_0440 at 447.788 kb on - strand, within Dsui_0440 at 447.825 kb on + strand, within Dsui_0440 at 447.961 kb on + strand at 448.008 kb on + strand at 448.016 kb on - strand at 448.973 kb on - strand, within Dsui_0441 at 449.514 kb on + strand at 449.522 kb on - strand at 449.565 kb on - strand at 449.565 kb on - strand at 449.737 kb on + strand, within Dsui_0442 at 450.036 kb on + strand, within Dsui_0442 at 450.037 kb on - strand, within Dsui_0442 at 450.037 kb on - strand, within Dsui_0442 at 450.101 kb on - strand, within Dsui_0442 at 450.217 kb on + strand, within Dsui_0442 at 450.220 kb on - strand, within Dsui_0442 at 450.220 kb on - strand, within Dsui_0442 at 450.288 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 447,027 + -0.1 447,027 + -0.2 447,035 - +2.1 447,134 + -0.2 447,142 - -2.2 447,142 - -0.9 447,151 + -0.4 447,156 + -0.3 447,225 - Dsui_0440 0.18 +0.4 447,290 - Dsui_0440 0.25 -1.5 447,296 + Dsui_0440 0.26 +0.6 447,304 - +0.1 447,309 - Dsui_0440 0.28 -2.5 447,336 - Dsui_0440 0.31 +1.1 447,339 + Dsui_0440 0.31 -0.8 447,386 + Dsui_0440 0.36 -0.5 447,393 - Dsui_0440 0.37 -2.9 447,442 + Dsui_0440 0.43 +0.0 447,475 + Dsui_0440 0.47 -0.1 447,475 + Dsui_0440 0.47 -0.4 447,569 + Dsui_0440 0.58 -0.1 447,788 - Dsui_0440 0.83 -0.9 447,825 + Dsui_0440 0.88 -0.3 447,961 + -0.2 448,008 + -2.5 448,016 - -0.2 448,973 - Dsui_0441 0.67 -4.6 449,514 + -0.9 449,522 - -0.8 449,565 - +0.1 449,565 - -0.2 449,737 + Dsui_0442 0.18 -2.9 450,036 + Dsui_0442 0.61 -0.9 450,037 - Dsui_0442 0.61 -0.2 450,037 - Dsui_0442 0.61 -1.2 450,101 - Dsui_0442 0.71 -0.3 450,217 + Dsui_0442 0.87 -1.9 450,220 - Dsui_0442 0.88 -0.5 450,220 - Dsui_0442 0.88 -0.0 450,288 - -0.5
Or see this region's nucleotide sequence