Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0428 and Dsui_0429 are separated by 286 nucleotides Dsui_0429 and Dsui_0430 are separated by 142 nucleotides
Dsui_0428: Dsui_0428 - methyl-accepting chemotaxis protein, at 432,673 to 434,526
_0428
Dsui_0429: Dsui_0429 - cystathionine beta-lyase/cystathionine gamma-synthase, at 434,813 to 435,961
_0429
Dsui_0430: Dsui_0430 - ABC-type branched-chain amino acid transport system, periplasmic component, at 436,104 to 437,216
_0430
Position (kb) 434
435
436 Strain fitness (log2 ratio) -2
-1
0
1 at 433.831 kb on - strand, within Dsui_0428 at 433.910 kb on + strand, within Dsui_0428 at 434.036 kb on - strand, within Dsui_0428 at 434.037 kb on - strand, within Dsui_0428 at 434.096 kb on + strand, within Dsui_0428 at 434.125 kb on + strand, within Dsui_0428 at 434.125 kb on + strand, within Dsui_0428 at 434.202 kb on + strand, within Dsui_0428 at 434.310 kb on + strand at 434.329 kb on - strand, within Dsui_0428 at 434.381 kb on - strand at 434.686 kb on + strand at 434.823 kb on + strand at 434.823 kb on + strand at 435.011 kb on - strand, within Dsui_0429 at 435.388 kb on + strand at 435.409 kb on - strand, within Dsui_0429 at 435.409 kb on - strand at 435.524 kb on + strand, within Dsui_0429 at 435.621 kb on - strand, within Dsui_0429 at 435.641 kb on - strand, within Dsui_0429 at 435.641 kb on - strand, within Dsui_0429 at 435.773 kb on + strand, within Dsui_0429 at 435.847 kb on - strand at 436.061 kb on - strand at 436.061 kb on - strand at 436.100 kb on - strand at 436.129 kb on + strand at 436.247 kb on + strand, within Dsui_0430 at 436.286 kb on + strand, within Dsui_0430 at 436.327 kb on + strand, within Dsui_0430 at 436.347 kb on - strand, within Dsui_0430 at 436.404 kb on + strand, within Dsui_0430 at 436.474 kb on - strand, within Dsui_0430 at 436.474 kb on - strand, within Dsui_0430 at 436.584 kb on + strand, within Dsui_0430 at 436.720 kb on - strand, within Dsui_0430 at 436.720 kb on - strand, within Dsui_0430 at 436.744 kb on - strand, within Dsui_0430 at 436.832 kb on + strand, within Dsui_0430 at 436.906 kb on - strand at 436.942 kb on - strand, within Dsui_0430
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 433,831 - Dsui_0428 0.62 -0.4 433,910 + Dsui_0428 0.67 -1.9 434,036 - Dsui_0428 0.74 -1.3 434,037 - Dsui_0428 0.74 -0.6 434,096 + Dsui_0428 0.77 +0.1 434,125 + Dsui_0428 0.78 +0.1 434,125 + Dsui_0428 0.78 -1.5 434,202 + Dsui_0428 0.82 -0.9 434,310 + +0.1 434,329 - Dsui_0428 0.89 -0.8 434,381 - -0.7 434,686 + +0.1 434,823 + -0.9 434,823 + -0.9 435,011 - Dsui_0429 0.17 +0.1 435,388 + +0.1 435,409 - Dsui_0429 0.52 -0.7 435,409 - +0.1 435,524 + Dsui_0429 0.62 -0.9 435,621 - Dsui_0429 0.70 -1.9 435,641 - Dsui_0429 0.72 -2.3 435,641 - Dsui_0429 0.72 +0.1 435,773 + Dsui_0429 0.84 +0.1 435,847 - +0.1 436,061 - -1.9 436,061 - -1.5 436,100 - -1.5 436,129 + -0.9 436,247 + Dsui_0430 0.13 -1.1 436,286 + Dsui_0430 0.16 -0.7 436,327 + Dsui_0430 0.20 -1.3 436,347 - Dsui_0430 0.22 -0.9 436,404 + Dsui_0430 0.27 -1.7 436,474 - Dsui_0430 0.33 -1.9 436,474 - Dsui_0430 0.33 -0.9 436,584 + Dsui_0430 0.43 -2.3 436,720 - Dsui_0430 0.55 -1.5 436,720 - Dsui_0430 0.55 -1.5 436,744 - Dsui_0430 0.58 -0.9 436,832 + Dsui_0430 0.65 +0.1 436,906 - +0.1 436,942 - Dsui_0430 0.75 -2.7
Or see this region's nucleotide sequence