Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0409 and Dsui_0410 are separated by 26 nucleotides Dsui_0410 and Dsui_0411 are separated by 369 nucleotides
Dsui_0409: Dsui_0409 - RND family efflux transporter, MFP subunit, at 409,449 to 410,603
_0409
Dsui_0410: Dsui_0410 - transcriptional regulator, at 410,630 to 411,265
_0410
Dsui_0411: Dsui_0411 - ABC-type dipeptide transport system, periplasmic component, at 411,635 to 413,245
_0411
Position (kb) 410
411
412 Strain fitness (log2 ratio) -2
-1
0
1 at 409.631 kb on + strand, within Dsui_0409 at 409.669 kb on + strand, within Dsui_0409 at 409.697 kb on - strand, within Dsui_0409 at 409.747 kb on - strand, within Dsui_0409 at 409.747 kb on - strand, within Dsui_0409 at 409.852 kb on - strand, within Dsui_0409 at 409.908 kb on - strand, within Dsui_0409 at 409.980 kb on - strand, within Dsui_0409 at 410.171 kb on - strand, within Dsui_0409 at 410.252 kb on + strand, within Dsui_0409 at 410.499 kb on + strand at 410.558 kb on - strand at 410.806 kb on + strand at 410.961 kb on - strand, within Dsui_0410 at 411.260 kb on + strand at 411.336 kb on - strand at 411.406 kb on - strand at 411.472 kb on - strand at 411.472 kb on - strand at 411.495 kb on + strand at 411.550 kb on - strand at 411.656 kb on - strand at 411.680 kb on + strand at 411.750 kb on + strand at 411.763 kb on - strand at 411.823 kb on - strand at 411.937 kb on + strand, within Dsui_0411 at 412.006 kb on + strand, within Dsui_0411 at 412.037 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 409,631 + Dsui_0409 0.16 +0.1 409,669 + Dsui_0409 0.19 -1.5 409,697 - Dsui_0409 0.21 -0.2 409,747 - Dsui_0409 0.26 +0.6 409,747 - Dsui_0409 0.26 -0.0 409,852 - Dsui_0409 0.35 -1.5 409,908 - Dsui_0409 0.40 -0.8 409,980 - Dsui_0409 0.46 +0.1 410,171 - Dsui_0409 0.63 +0.0 410,252 + Dsui_0409 0.70 +0.1 410,499 + -0.9 410,558 - +0.0 410,806 + +1.1 410,961 - Dsui_0410 0.52 -0.2 411,260 + -0.9 411,336 - +0.1 411,406 - -0.9 411,472 - -0.9 411,472 - +1.1 411,495 + +0.1 411,550 - -1.5 411,656 - +0.1 411,680 + -1.9 411,750 + +0.1 411,763 - -0.9 411,823 - +0.1 411,937 + Dsui_0411 0.19 -1.5 412,006 + Dsui_0411 0.23 -1.5 412,037 + +0.1
Or see this region's nucleotide sequence