Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0283 and Dsui_0284 are separated by 42 nucleotides Dsui_0284 and Dsui_0285 are separated by 295 nucleotides
Dsui_0283: Dsui_0283 - chaperonin GroL, at 283,284 to 284,933
_0283
Dsui_0284: Dsui_0284 - Co-chaperonin GroES, at 284,976 to 285,266
_0284
Dsui_0285: Dsui_0285 - methionine aminopeptidase, type I, at 285,562 to 286,386
_0285
Position (kb) 284
285
286 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 284.974 kb on - strand at 284.981 kb on - strand at 284.981 kb on - strand at 285.000 kb on - strand at 285.306 kb on - strand at 285.343 kb on - strand at 285.442 kb on - strand at 285.442 kb on - strand at 285.537 kb on - strand at 285.560 kb on + strand at 285.563 kb on - strand at 285.568 kb on - strand at 285.568 kb on - strand at 285.574 kb on - strand at 285.585 kb on - strand at 285.610 kb on + strand at 285.658 kb on + strand, within Dsui_0285 at 285.666 kb on - strand, within Dsui_0285 at 285.697 kb on + strand, within Dsui_0285 at 285.703 kb on + strand at 285.711 kb on - strand, within Dsui_0285 at 285.773 kb on - strand, within Dsui_0285 at 285.797 kb on - strand, within Dsui_0285 at 285.824 kb on - strand, within Dsui_0285 at 285.852 kb on - strand, within Dsui_0285 at 285.852 kb on - strand, within Dsui_0285 at 285.887 kb on + strand at 285.895 kb on - strand, within Dsui_0285 at 285.913 kb on + strand at 285.983 kb on + strand, within Dsui_0285 at 286.042 kb on + strand at 286.154 kb on - strand, within Dsui_0285 at 286.172 kb on + strand at 286.178 kb on + strand, within Dsui_0285 at 286.179 kb on - strand, within Dsui_0285 at 286.180 kb on - strand, within Dsui_0285 at 286.180 kb on - strand, within Dsui_0285 at 286.180 kb on - strand, within Dsui_0285 at 286.180 kb on - strand, within Dsui_0285 at 286.180 kb on - strand, within Dsui_0285 at 286.186 kb on - strand, within Dsui_0285 at 286.190 kb on - strand, within Dsui_0285
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 284,974 - -0.3 284,981 - +0.3 284,981 - +0.1 285,000 - -0.0 285,306 - -0.1 285,343 - -0.2 285,442 - -1.4 285,442 - -1.4 285,537 - -2.1 285,560 + +0.2 285,563 - +0.2 285,568 - -2.1 285,568 - -0.8 285,574 - +0.2 285,585 - +0.2 285,610 + -0.8 285,658 + Dsui_0285 0.12 +0.2 285,666 - Dsui_0285 0.13 -1.8 285,697 + Dsui_0285 0.16 +0.2 285,703 + -0.8 285,711 - Dsui_0285 0.18 -2.4 285,773 - Dsui_0285 0.26 +0.2 285,797 - Dsui_0285 0.28 +0.2 285,824 - Dsui_0285 0.32 +0.2 285,852 - Dsui_0285 0.35 -1.8 285,852 - Dsui_0285 0.35 -0.8 285,887 + +0.2 285,895 - Dsui_0285 0.40 -1.8 285,913 + +0.2 285,983 + Dsui_0285 0.51 -3.9 286,042 + +0.2 286,154 - Dsui_0285 0.72 -1.3 286,172 + +0.2 286,178 + Dsui_0285 0.75 -2.4 286,179 - Dsui_0285 0.75 +1.8 286,180 - Dsui_0285 0.75 +0.2 286,180 - Dsui_0285 0.75 +0.2 286,180 - Dsui_0285 0.75 +0.2 286,180 - Dsui_0285 0.75 +0.2 286,180 - Dsui_0285 0.75 -2.1 286,186 - Dsui_0285 0.76 -0.8 286,190 - Dsui_0285 0.76 -1.5
Or see this region's nucleotide sequence