Strain Fitness in Dechlorosoma suillum PS around Dsui_0283

Experiment: ALP with Bacitracin 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0282 and Dsui_0283 are separated by 249 nucleotidesDsui_0283 and Dsui_0284 are separated by 42 nucleotidesDsui_0284 and Dsui_0285 are separated by 295 nucleotides Dsui_0282: Dsui_0282 - hypothetical protein, at 282,591 to 283,034 _0282 Dsui_0283: Dsui_0283 - chaperonin GroL, at 283,284 to 284,933 _0283 Dsui_0284: Dsui_0284 - Co-chaperonin GroES, at 284,976 to 285,266 _0284 Dsui_0285: Dsui_0285 - methionine aminopeptidase, type I, at 285,562 to 286,386 _0285 Position (kb) 283 284 285Strain fitness (log2 ratio) -2 -1 0 1at 282.426 kb on - strandat 282.589 kb on + strandat 282.589 kb on + strandat 282.669 kb on - strand, within Dsui_0282at 282.737 kb on - strand, within Dsui_0282at 282.878 kb on - strand, within Dsui_0282at 282.887 kb on + strand, within Dsui_0282at 282.902 kb on + strand, within Dsui_0282at 282.910 kb on - strand, within Dsui_0282at 282.910 kb on - strand, within Dsui_0282at 282.953 kb on + strand, within Dsui_0282at 282.961 kb on - strand, within Dsui_0282at 282.998 kb on + strandat 283.026 kb on + strandat 283.274 kb on - strandat 284.974 kb on - strandat 284.981 kb on - strandat 284.981 kb on - strandat 285.000 kb on - strandat 285.306 kb on - strandat 285.343 kb on - strandat 285.442 kb on - strandat 285.442 kb on - strandat 285.537 kb on - strandat 285.560 kb on + strandat 285.563 kb on - strandat 285.568 kb on - strandat 285.568 kb on - strandat 285.574 kb on - strandat 285.585 kb on - strandat 285.610 kb on + strandat 285.658 kb on + strand, within Dsui_0285at 285.666 kb on - strand, within Dsui_0285at 285.697 kb on + strand, within Dsui_0285at 285.703 kb on + strandat 285.711 kb on - strand, within Dsui_0285at 285.773 kb on - strand, within Dsui_0285at 285.797 kb on - strand, within Dsui_0285at 285.824 kb on - strand, within Dsui_0285at 285.852 kb on - strand, within Dsui_0285at 285.852 kb on - strand, within Dsui_0285at 285.887 kb on + strandat 285.895 kb on - strand, within Dsui_0285at 285.913 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml
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282,426 - -1.4
282,589 + -0.2
282,589 + -0.3
282,669 - Dsui_0282 0.18 -0.8
282,737 - Dsui_0282 0.33 -0.2
282,878 - Dsui_0282 0.65 -0.4
282,887 + Dsui_0282 0.67 -0.8
282,902 + Dsui_0282 0.70 +0.2
282,910 - Dsui_0282 0.72 -0.7
282,910 - Dsui_0282 0.72 -0.6
282,953 + Dsui_0282 0.82 -0.8
282,961 - Dsui_0282 0.83 +0.7
282,998 + -0.1
283,026 + -1.4
283,274 - -0.2
284,974 - -0.3
284,981 - +0.3
284,981 - +0.1
285,000 - -0.0
285,306 - -0.1
285,343 - -0.2
285,442 - -1.4
285,442 - -1.4
285,537 - -2.1
285,560 + +0.2
285,563 - +0.2
285,568 - -2.1
285,568 - -0.8
285,574 - +0.2
285,585 - +0.2
285,610 + -0.8
285,658 + Dsui_0285 0.12 +0.2
285,666 - Dsui_0285 0.13 -1.8
285,697 + Dsui_0285 0.16 +0.2
285,703 + -0.8
285,711 - Dsui_0285 0.18 -2.4
285,773 - Dsui_0285 0.26 +0.2
285,797 - Dsui_0285 0.28 +0.2
285,824 - Dsui_0285 0.32 +0.2
285,852 - Dsui_0285 0.35 -1.8
285,852 - Dsui_0285 0.35 -0.8
285,887 + +0.2
285,895 - Dsui_0285 0.40 -1.8
285,913 + +0.2

Or see this region's nucleotide sequence