Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25200 and BWI76_RS25205 are separated by 54 nucleotides BWI76_RS25205 and BWI76_RS25210 are separated by 135 nucleotides BWI76_RS25210 and BWI76_RS25215 overlap by 1 nucleotides BWI76_RS25215 and BWI76_RS25220 are separated by 18 nucleotides
BWI76_RS25200: BWI76_RS25200 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 5,242,406 to 5,243,665
_RS25200
BWI76_RS25205: BWI76_RS25205 - hypothetical protein, at 5,243,720 to 5,243,974
_RS25205
BWI76_RS25210: BWI76_RS25210 - sulfate transporter, at 5,244,110 to 5,244,400
_RS25210
BWI76_RS25215: BWI76_RS25215 - phospholipid-binding protein MlaC, at 5,244,400 to 5,245,035
_RS25215
BWI76_RS25220: BWI76_RS25220 - outer membrane lipid asymmetry maintenance protein MlaD, at 5,245,054 to 5,245,605
_RS25220
Position (kb) 5244
5245 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5243.761 kb on - strand, within BWI76_RS25205 at 5244.001 kb on - strand at 5244.019 kb on - strand at 5244.039 kb on - strand at 5244.176 kb on + strand, within BWI76_RS25210 at 5244.381 kb on + strand at 5244.440 kb on + strand at 5244.624 kb on + strand, within BWI76_RS25215 at 5244.666 kb on - strand, within BWI76_RS25215 at 5244.677 kb on - strand, within BWI76_RS25215 at 5244.737 kb on - strand, within BWI76_RS25215 at 5244.890 kb on + strand, within BWI76_RS25215 at 5244.956 kb on - strand, within BWI76_RS25215 at 5245.147 kb on + strand, within BWI76_RS25220 at 5245.147 kb on - strand, within BWI76_RS25220 at 5245.224 kb on + strand, within BWI76_RS25220 at 5245.268 kb on + strand, within BWI76_RS25220 at 5245.326 kb on + strand, within BWI76_RS25220 at 5245.369 kb on - strand, within BWI76_RS25220
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 5,243,761 - BWI76_RS25205 0.16 -0.8 5,244,001 - -1.5 5,244,019 - +0.1 5,244,039 - +0.7 5,244,176 + BWI76_RS25210 0.23 +1.0 5,244,381 + +0.1 5,244,440 + -1.3 5,244,624 + BWI76_RS25215 0.35 -0.4 5,244,666 - BWI76_RS25215 0.42 -0.4 5,244,677 - BWI76_RS25215 0.44 -0.6 5,244,737 - BWI76_RS25215 0.53 -0.3 5,244,890 + BWI76_RS25215 0.77 -3.5 5,244,956 - BWI76_RS25215 0.87 +2.0 5,245,147 + BWI76_RS25220 0.17 -1.9 5,245,147 - BWI76_RS25220 0.17 -0.5 5,245,224 + BWI76_RS25220 0.31 +2.2 5,245,268 + BWI76_RS25220 0.39 -0.5 5,245,326 + BWI76_RS25220 0.49 +0.7 5,245,369 - BWI76_RS25220 0.57 +1.7
Or see this region's nucleotide sequence