Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11370 and BWI76_RS11375 overlap by 4 nucleotides BWI76_RS11375 and BWI76_RS11380 overlap by 4 nucleotides BWI76_RS11380 and BWI76_RS11385 are separated by 58 nucleotides
BWI76_RS11370: BWI76_RS11370 - iron-dicitrate transporter subunit FecD, at 2,396,149 to 2,397,102
_RS11370
BWI76_RS11375: BWI76_RS11375 - iron-dicitrate transporter permease subunit, at 2,397,099 to 2,398,097
_RS11375
BWI76_RS11380: BWI76_RS11380 - iron-dicitrate transporter substrate-binding subunit, at 2,398,094 to 2,398,996
_RS11380
BWI76_RS11385: BWI76_RS11385 - TonB-dependent siderophore receptor, at 2,399,055 to 2,401,385
_RS11385
Position (kb)
2398
2399 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2397.136 kb on + strand at 2397.144 kb on - strand at 2397.183 kb on + strand at 2397.191 kb on - strand at 2397.264 kb on + strand, within BWI76_RS11375 at 2397.605 kb on - strand, within BWI76_RS11375 at 2397.760 kb on + strand, within BWI76_RS11375 at 2398.281 kb on + strand, within BWI76_RS11380 at 2398.328 kb on - strand, within BWI76_RS11380 at 2398.416 kb on - strand, within BWI76_RS11380 at 2398.872 kb on - strand, within BWI76_RS11380 at 2398.883 kb on - strand, within BWI76_RS11380 at 2398.908 kb on - strand at 2398.958 kb on - strand at 2399.078 kb on + strand at 2399.208 kb on + strand at 2399.789 kb on - strand, within BWI76_RS11385 at 2399.789 kb on - strand, within BWI76_RS11385 at 2399.853 kb on + strand, within BWI76_RS11385 at 2399.885 kb on + strand, within BWI76_RS11385
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 2,397,136 + -1.0 2,397,144 - -0.4 2,397,183 + -0.1 2,397,191 - -1.1 2,397,264 + BWI76_RS11375 0.17 -0.3 2,397,605 - BWI76_RS11375 0.51 +0.5 2,397,760 + BWI76_RS11375 0.66 -0.1 2,398,281 + BWI76_RS11380 0.21 +1.6 2,398,328 - BWI76_RS11380 0.26 -0.2 2,398,416 - BWI76_RS11380 0.36 +0.9 2,398,872 - BWI76_RS11380 0.86 +0.6 2,398,883 - BWI76_RS11380 0.87 -3.0 2,398,908 - -0.5 2,398,958 - +0.5 2,399,078 + +0.1 2,399,208 + +1.2 2,399,789 - BWI76_RS11385 0.31 +3.6 2,399,789 - BWI76_RS11385 0.31 -0.1 2,399,853 + BWI76_RS11385 0.34 +3.0 2,399,885 + BWI76_RS11385 0.36 -0.4
Or see this region's nucleotide sequence