Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00900

Experiment: Uridine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS00890 and BWI76_RS00895 overlap by 56 nucleotidesBWI76_RS00895 and BWI76_RS00900 overlap by 20 nucleotidesBWI76_RS00900 and BWI76_RS00905 are separated by 126 nucleotides BWI76_RS00890: BWI76_RS00890 - vitamin B12/cobalamin outer membrane transporter, at 183,449 to 185,317 _RS00890 BWI76_RS00895: BWI76_RS00895 - glutamate racemase, at 185,262 to 186,116 _RS00895 BWI76_RS00900: BWI76_RS00900 - hypothetical protein, at 186,097 to 186,364 _RS00900 BWI76_RS00905: BWI76_RS00905 - 16S ribosomal RNA, at 186,491 to 188,044 _RS00905 Position (kb) 186 187Strain fitness (log2 ratio) -1 0 1 2at 185.156 kb on - strandat 185.169 kb on + strandat 185.258 kb on + strandat 186.174 kb on + strand, within BWI76_RS00900

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Per-strain Table

Position Strand Gene LocusTag Fraction Uridine (N)
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185,156 - +0.4
185,169 + +0.1
185,258 + +2.5
186,174 + BWI76_RS00900 0.29 +1.8

Or see this region's nucleotide sequence