Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2448

Experiment: MoLS4 without vitamins with Casaminos 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without vitamins with Casaminos 0.05%
2,551,334	-	panB	DVU2446	0.89	-1.8
2,551,533	+				-0.4
2,551,572	+				-0.0
2,551,572	+				-0.5
2,551,572	+				+0.9
2,551,580	-				-0.3
2,551,584	-				-0.3
2,551,730	-		DVU2447	0.30	-0.2
2,551,732	-		DVU2447	0.31	+0.1
2,551,782	+		DVU2447	0.39	-0.5
2,551,813	-		DVU2447	0.45	-0.1
2,551,875	-		DVU2447	0.56	-0.0
2,551,921	+		DVU2447	0.64	-0.1
2,551,929	-		DVU2447	0.65	-1.5
2,551,983	-		DVU2447	0.74	+0.5
2,552,012	-		DVU2447	0.79	-0.2
2,552,051	-		DVU2447	0.86	+0.4
2,552,077	-				+0.9
2,552,090	+				-1.2
2,552,095	+				+0.1
2,552,150	+				-2.3
2,552,169	+				-0.1
2,552,205	-				-2.1
2,552,207	+				-0.2
2,552,215	-				-0.3
2,552,222	-				-0.4
2,552,222	-				-0.2
2,552,241	-				-0.3
2,552,243	-				-0.0
2,552,243	-				-0.7
2,552,243	-				-2.3
2,552,253	-				+1.9
2,552,408	+	panC	DVU2448	0.12	-2.4
2,552,416	-	panC	DVU2448	0.13	-1.3
2,552,416	-	panC	DVU2448	0.13	-1.3
2,552,416	-	panC	DVU2448	0.13	-0.7
2,552,416	-	panC	DVU2448	0.13	-2.9
2,552,431	+	panC	DVU2448	0.15	-3.5
2,552,434	-	panC	DVU2448	0.15	-0.7
2,552,596	+	panC	DVU2448	0.34	-2.0
2,552,669	+	panC	DVU2448	0.43	-3.9
2,552,674	+	panC	DVU2448	0.44	-1.9
2,552,674	+	panC	DVU2448	0.44	-0.4
2,552,682	-	panC	DVU2448	0.44	-1.4
2,552,682	-	panC	DVU2448	0.44	-1.4
2,552,682	-	panC	DVU2448	0.44	-3.7
2,552,683	+	panC	DVU2448	0.45	-2.6
2,552,691	-	panC	DVU2448	0.46	-1.1
2,552,691	-	panC	DVU2448	0.46	-2.2
2,552,865	+	panC	DVU2448	0.66	-3.1
2,552,873	-	panC	DVU2448	0.67	-2.2
2,552,874	-	panC	DVU2448	0.67	-0.1
2,552,942	-	panC	DVU2448	0.75	-3.2
2,552,952	-	panC	DVU2448	0.76	-3.1
2,553,025	-	panC	DVU2448	0.85	-2.8
2,553,039	-	panC	DVU2448	0.86	-0.9
2,553,051	+	panC	DVU2448	0.88	-4.7
2,553,051	+	panC	DVU2448	0.88	-3.6
2,553,078	+				-1.7