Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03797 and H281DRAFT_03798 are separated by 296 nucleotides H281DRAFT_03798 and H281DRAFT_03799 are separated by 16 nucleotides H281DRAFT_03799 and H281DRAFT_03800 are separated by 37 nucleotides
H281DRAFT_03797: H281DRAFT_03797 - phospholipase C, at 317,310 to 318,830
_03797
H281DRAFT_03798: H281DRAFT_03798 - NitT/TauT family transport system permease protein, at 319,127 to 319,990
_03798
H281DRAFT_03799: H281DRAFT_03799 - NitT/TauT family transport system ATP-binding protein, at 320,007 to 320,801
_03799
H281DRAFT_03800: H281DRAFT_03800 - NitT/TauT family transport system substrate-binding protein, at 320,839 to 321,858
_03800
Position (kb) 319
320 Strain fitness (log2 ratio) -1
0
1 at 318.151 kb on + strand, within H281DRAFT_03797 at 318.224 kb on - strand, within H281DRAFT_03797 at 318.296 kb on + strand, within H281DRAFT_03797 at 318.466 kb on + strand, within H281DRAFT_03797 at 318.984 kb on + strand at 318.985 kb on - strand at 319.443 kb on + strand, within H281DRAFT_03798 at 320.789 kb on + strand at 320.789 kb on + strand at 320.885 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 318,151 + H281DRAFT_03797 0.55 +0.5 318,224 - H281DRAFT_03797 0.60 +0.2 318,296 + H281DRAFT_03797 0.65 +0.7 318,466 + H281DRAFT_03797 0.76 +0.2 318,984 + +0.8 318,985 - +1.4 319,443 + H281DRAFT_03798 0.37 +0.7 320,789 + -0.8 320,789 + +0.5 320,885 + -1.1
Or see this region's nucleotide sequence