Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03261 and H281DRAFT_03262 are separated by 170 nucleotides H281DRAFT_03262 and H281DRAFT_03263 are separated by 19 nucleotides
H281DRAFT_03261: H281DRAFT_03261 - transcriptional regulator, LysR family, at 316,943 to 317,854
_03261
H281DRAFT_03262: H281DRAFT_03262 - Sulfotransferase family, at 318,025 to 319,095
_03262
H281DRAFT_03263: H281DRAFT_03263 - Predicted arabinose efflux permease, MFS family, at 319,115 to 320,524
_03263
Position (kb) 318
319
320 Strain fitness (log2 ratio) -2
-1
0
1 at 317.668 kb on + strand, within H281DRAFT_03261 at 317.817 kb on - strand at 317.834 kb on + strand at 317.982 kb on - strand at 318.260 kb on - strand, within H281DRAFT_03262 at 318.564 kb on + strand, within H281DRAFT_03262 at 318.712 kb on + strand, within H281DRAFT_03262 at 318.735 kb on + strand, within H281DRAFT_03262 at 318.737 kb on - strand, within H281DRAFT_03262 at 318.841 kb on + strand, within H281DRAFT_03262 at 318.957 kb on - strand, within H281DRAFT_03262 at 319.171 kb on - strand at 319.434 kb on + strand, within H281DRAFT_03263 at 319.457 kb on - strand, within H281DRAFT_03263 at 319.467 kb on + strand, within H281DRAFT_03263 at 319.624 kb on - strand, within H281DRAFT_03263 at 319.897 kb on + strand, within H281DRAFT_03263 at 319.897 kb on + strand, within H281DRAFT_03263 at 319.897 kb on + strand, within H281DRAFT_03263 at 319.899 kb on + strand, within H281DRAFT_03263 at 319.929 kb on - strand, within H281DRAFT_03263
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 317,668 + H281DRAFT_03261 0.79 -0.1 317,817 - +0.6 317,834 + -0.1 317,982 - +1.0 318,260 - H281DRAFT_03262 0.22 +0.9 318,564 + H281DRAFT_03262 0.50 +0.5 318,712 + H281DRAFT_03262 0.64 +0.1 318,735 + H281DRAFT_03262 0.66 +1.2 318,737 - H281DRAFT_03262 0.66 +0.3 318,841 + H281DRAFT_03262 0.76 +0.8 318,957 - H281DRAFT_03262 0.87 +0.4 319,171 - +0.4 319,434 + H281DRAFT_03263 0.23 +0.6 319,457 - H281DRAFT_03263 0.24 +0.4 319,467 + H281DRAFT_03263 0.25 -0.1 319,624 - H281DRAFT_03263 0.36 +0.2 319,897 + H281DRAFT_03263 0.55 +0.6 319,897 + H281DRAFT_03263 0.55 -0.3 319,897 + H281DRAFT_03263 0.55 -1.8 319,899 + H281DRAFT_03263 0.56 +0.4 319,929 - H281DRAFT_03263 0.58 +0.4
Or see this region's nucleotide sequence