Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00909 and H281DRAFT_00910 are separated by 164 nucleotides H281DRAFT_00910 and H281DRAFT_00911 are separated by 10 nucleotides H281DRAFT_00911 and H281DRAFT_00912 are separated by 1 nucleotides
H281DRAFT_00909: H281DRAFT_00909 - phosphoribosylformylglycinamidine synthase, at 1,008,216 to 1,012,487
_00909
H281DRAFT_00910: H281DRAFT_00910 - peptidyl-prolyl cis-trans isomerase C, at 1,012,652 to 1,013,431
_00910
H281DRAFT_00911: H281DRAFT_00911 - transcriptional regulator, BolA protein family, at 1,013,442 to 1,013,753
_00911
H281DRAFT_00912: H281DRAFT_00912 - intracellular septation protein, at 1,013,755 to 1,014,285
_00912
Position (kb) 1012
1013
1014 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1011.772 kb on - strand, within H281DRAFT_00909 at 1012.625 kb on - strand at 1012.647 kb on - strand at 1012.654 kb on - strand at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1013.038 kb on - strand, within H281DRAFT_00910 at 1013.477 kb on - strand, within H281DRAFT_00911 at 1013.477 kb on - strand, within H281DRAFT_00911 at 1013.534 kb on - strand, within H281DRAFT_00911 at 1013.691 kb on - strand, within H281DRAFT_00911 at 1013.744 kb on + strand at 1013.771 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 1,011,772 - H281DRAFT_00909 0.83 -3.1 1,012,625 - +0.3 1,012,647 - +0.1 1,012,654 - +0.2 1,012,875 + H281DRAFT_00910 0.29 +0.1 1,012,875 + H281DRAFT_00910 0.29 +0.6 1,012,875 + H281DRAFT_00910 0.29 -0.9 1,012,875 + H281DRAFT_00910 0.29 +0.3 1,012,875 + H281DRAFT_00910 0.29 -0.3 1,012,876 - H281DRAFT_00910 0.29 -0.4 1,012,876 - H281DRAFT_00910 0.29 +1.4 1,012,876 - H281DRAFT_00910 0.29 +1.0 1,012,876 - H281DRAFT_00910 0.29 +0.1 1,013,038 - H281DRAFT_00910 0.49 -0.1 1,013,477 - H281DRAFT_00911 0.11 -0.4 1,013,477 - H281DRAFT_00911 0.11 +0.5 1,013,534 - H281DRAFT_00911 0.29 -0.1 1,013,691 - H281DRAFT_00911 0.80 +0.4 1,013,744 + +0.1 1,013,771 + -0.9
Or see this region's nucleotide sequence