Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00185 and H281DRAFT_00186 are separated by 102 nucleotides H281DRAFT_00186 and H281DRAFT_00187 are separated by 14 nucleotides H281DRAFT_00187 and H281DRAFT_00188 are separated by 80 nucleotides
H281DRAFT_00185: H281DRAFT_00185 - septum site-determining protein MinC, at 199,658 to 200,482
_00185
H281DRAFT_00186: H281DRAFT_00186 - septum site-determining protein MinD, at 200,585 to 201,400
_00186
H281DRAFT_00187: H281DRAFT_00187 - cell division topological specificity factor MinE, at 201,415 to 201,672
_00187
H281DRAFT_00188: H281DRAFT_00188 - H+/Cl- antiporter ClcA, at 201,753 to 203,270
_00188
Position (kb) 200
201
202 Strain fitness (log2 ratio) -1
0
1 at 199.629 kb on + strand at 199.657 kb on + strand at 199.658 kb on - strand at 200.060 kb on - strand, within H281DRAFT_00185 at 200.195 kb on + strand, within H281DRAFT_00185 at 200.269 kb on + strand, within H281DRAFT_00185 at 200.269 kb on + strand, within H281DRAFT_00185 at 200.270 kb on - strand, within H281DRAFT_00185 at 200.270 kb on - strand, within H281DRAFT_00185 at 200.273 kb on + strand, within H281DRAFT_00185 at 200.274 kb on - strand, within H281DRAFT_00185 at 200.274 kb on - strand, within H281DRAFT_00185 at 200.274 kb on - strand, within H281DRAFT_00185 at 200.379 kb on - strand, within H281DRAFT_00185 at 200.481 kb on - strand at 200.481 kb on - strand at 200.538 kb on + strand at 200.539 kb on - strand at 200.756 kb on + strand, within H281DRAFT_00186 at 200.757 kb on - strand, within H281DRAFT_00186 at 200.930 kb on + strand, within H281DRAFT_00186 at 200.931 kb on - strand, within H281DRAFT_00186 at 201.131 kb on + strand, within H281DRAFT_00186 at 201.299 kb on + strand, within H281DRAFT_00186 at 201.300 kb on - strand, within H281DRAFT_00186 at 201.302 kb on - strand, within H281DRAFT_00186 at 201.650 kb on + strand at 201.668 kb on + strand at 201.668 kb on + strand at 201.668 kb on + strand at 201.669 kb on - strand at 201.670 kb on + strand at 201.670 kb on + strand at 201.670 kb on + strand at 201.670 kb on + strand at 201.671 kb on - strand at 201.876 kb on - strand at 201.876 kb on - strand at 201.876 kb on - strand at 201.876 kb on - strand at 201.876 kb on - strand at 201.876 kb on - strand at 201.985 kb on + strand, within H281DRAFT_00188 at 201.985 kb on + strand, within H281DRAFT_00188 at 202.147 kb on + strand, within H281DRAFT_00188 at 202.148 kb on - strand, within H281DRAFT_00188 at 202.277 kb on - strand, within H281DRAFT_00188
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 199,629 + -1.1 199,657 + +0.4 199,658 - -1.0 200,060 - H281DRAFT_00185 0.49 -1.7 200,195 + H281DRAFT_00185 0.65 -0.6 200,269 + H281DRAFT_00185 0.74 +0.0 200,269 + H281DRAFT_00185 0.74 +0.7 200,270 - H281DRAFT_00185 0.74 +0.4 200,270 - H281DRAFT_00185 0.74 +0.3 200,273 + H281DRAFT_00185 0.75 -0.0 200,274 - H281DRAFT_00185 0.75 -0.4 200,274 - H281DRAFT_00185 0.75 -0.2 200,274 - H281DRAFT_00185 0.75 +0.3 200,379 - H281DRAFT_00185 0.87 +0.9 200,481 - -0.3 200,481 - -0.7 200,538 + +0.3 200,539 - +0.4 200,756 + H281DRAFT_00186 0.21 +0.4 200,757 - H281DRAFT_00186 0.21 -0.1 200,930 + H281DRAFT_00186 0.42 -0.1 200,931 - H281DRAFT_00186 0.42 +0.0 201,131 + H281DRAFT_00186 0.67 +0.1 201,299 + H281DRAFT_00186 0.88 -0.0 201,300 - H281DRAFT_00186 0.88 +0.6 201,302 - H281DRAFT_00186 0.88 +1.1 201,650 + +0.5 201,668 + -1.1 201,668 + -1.4 201,668 + +0.5 201,669 - +0.3 201,670 + +0.2 201,670 + +0.3 201,670 + +0.1 201,670 + -0.5 201,671 - +0.3 201,876 - -0.2 201,876 - +0.3 201,876 - -0.8 201,876 - -0.7 201,876 - -0.5 201,876 - -0.6 201,985 + H281DRAFT_00188 0.15 +0.1 201,985 + H281DRAFT_00188 0.15 -1.0 202,147 + H281DRAFT_00188 0.26 +0.1 202,148 - H281DRAFT_00188 0.26 +0.8 202,277 - H281DRAFT_00188 0.35 -0.2
Or see this region's nucleotide sequence