Experiment: ALP with Chloride 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3344 and Dsui_3345 are separated by 10 nucleotides Dsui_3345 and Dsui_3346 are separated by 5 nucleotides
Dsui_3344: Dsui_3344 - phosphomannomutase, at 3,582,780 to 3,584,174
_3344
Dsui_3345: Dsui_3345 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 3,584,185 to 3,585,429
_3345
Dsui_3346: Dsui_3346 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 3,585,435 to 3,586,697
_3346
Position (kb)
3584
3585
3586 Strain fitness (log2 ratio)
-2
-1
0
1 at 3584.221 kb on + strand at 3584.233 kb on - strand at 3584.266 kb on + strand at 3584.354 kb on + strand, within Dsui_3345 at 3584.402 kb on - strand, within Dsui_3345 at 3584.497 kb on + strand, within Dsui_3345 at 3584.647 kb on + strand, within Dsui_3345 at 3584.675 kb on + strand, within Dsui_3345 at 3584.714 kb on + strand, within Dsui_3345 at 3584.719 kb on + strand, within Dsui_3345 at 3584.726 kb on + strand, within Dsui_3345 at 3584.726 kb on + strand, within Dsui_3345 at 3584.726 kb on + strand, within Dsui_3345 at 3584.731 kb on + strand, within Dsui_3345 at 3584.734 kb on - strand, within Dsui_3345 at 3584.834 kb on + strand, within Dsui_3345 at 3584.908 kb on - strand, within Dsui_3345 at 3584.908 kb on - strand, within Dsui_3345 at 3585.021 kb on + strand, within Dsui_3345 at 3585.527 kb on + strand at 3585.583 kb on + strand, within Dsui_3346 at 3585.591 kb on + strand, within Dsui_3346 at 3585.625 kb on - strand, within Dsui_3346 at 3585.676 kb on + strand, within Dsui_3346 at 3585.707 kb on + strand, within Dsui_3346 at 3585.715 kb on - strand, within Dsui_3346 at 3585.715 kb on - strand, within Dsui_3346 at 3585.715 kb on - strand, within Dsui_3346 at 3585.736 kb on + strand, within Dsui_3346 at 3585.736 kb on + strand, within Dsui_3346 at 3585.748 kb on + strand, within Dsui_3346 at 3585.751 kb on - strand, within Dsui_3346 at 3585.766 kb on - strand at 3585.769 kb on + strand, within Dsui_3346 at 3585.790 kb on + strand, within Dsui_3346 at 3585.798 kb on - strand, within Dsui_3346 at 3585.885 kb on - strand at 3585.964 kb on + strand, within Dsui_3346 at 3586.031 kb on + strand, within Dsui_3346 at 3586.031 kb on + strand, within Dsui_3346 at 3586.041 kb on - strand at 3586.106 kb on - strand, within Dsui_3346 at 3586.108 kb on + strand, within Dsui_3346 at 3586.117 kb on + strand, within Dsui_3346 at 3586.136 kb on - strand, within Dsui_3346 at 3586.192 kb on - strand, within Dsui_3346 at 3586.224 kb on - strand, within Dsui_3346
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Chloride 75 mM remove 3,584,221 + -0.2 3,584,233 - +0.3 3,584,266 + -0.2 3,584,354 + Dsui_3345 0.14 -1.6 3,584,402 - Dsui_3345 0.17 -0.7 3,584,497 + Dsui_3345 0.25 -0.7 3,584,647 + Dsui_3345 0.37 -0.1 3,584,675 + Dsui_3345 0.39 -0.2 3,584,714 + Dsui_3345 0.42 -0.4 3,584,719 + Dsui_3345 0.43 -1.5 3,584,726 + Dsui_3345 0.43 +0.5 3,584,726 + Dsui_3345 0.43 -0.4 3,584,726 + Dsui_3345 0.43 -1.0 3,584,731 + Dsui_3345 0.44 -0.7 3,584,734 - Dsui_3345 0.44 -1.3 3,584,834 + Dsui_3345 0.52 -0.8 3,584,908 - Dsui_3345 0.58 +0.3 3,584,908 - Dsui_3345 0.58 -2.5 3,585,021 + Dsui_3345 0.67 +0.0 3,585,527 + -0.7 3,585,583 + Dsui_3346 0.12 -0.7 3,585,591 + Dsui_3346 0.12 -0.5 3,585,625 - Dsui_3346 0.15 -1.3 3,585,676 + Dsui_3346 0.19 -0.4 3,585,707 + Dsui_3346 0.22 +0.0 3,585,715 - Dsui_3346 0.22 +0.3 3,585,715 - Dsui_3346 0.22 -0.7 3,585,715 - Dsui_3346 0.22 -1.7 3,585,736 + Dsui_3346 0.24 -0.5 3,585,736 + Dsui_3346 0.24 -1.0 3,585,748 + Dsui_3346 0.25 -0.1 3,585,751 - Dsui_3346 0.25 -1.7 3,585,766 - -0.7 3,585,769 + Dsui_3346 0.26 -0.9 3,585,790 + Dsui_3346 0.28 -0.2 3,585,798 - Dsui_3346 0.29 -0.7 3,585,885 - +0.3 3,585,964 + Dsui_3346 0.42 +0.3 3,586,031 + Dsui_3346 0.47 +0.3 3,586,031 + Dsui_3346 0.47 -2.7 3,586,041 - +0.3 3,586,106 - Dsui_3346 0.53 -2.0 3,586,108 + Dsui_3346 0.53 -0.3 3,586,117 + Dsui_3346 0.54 -0.3 3,586,136 - Dsui_3346 0.56 -1.3 3,586,192 - Dsui_3346 0.60 +0.3 3,586,224 - Dsui_3346 0.62 -1.3
Or see this region's nucleotide sequence