Experiment: ALP with Chloride 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3241 and Dsui_3242 overlap by 17 nucleotides Dsui_3242 and Dsui_3243 are separated by 21 nucleotides Dsui_3243 and Dsui_3244 are separated by 22 nucleotides Dsui_3244 and Dsui_3245 are separated by 66 nucleotides Dsui_3245 and Dsui_3246 are separated by 12 nucleotides Dsui_3246 and Dsui_3247 overlap by 1 nucleotides
Dsui_3241: Dsui_3241 - NTP pyrophosphohydrolase, at 3,485,186 to 3,485,812
_3241
Dsui_3242: Dsui_3242 - hypothetical protein, at 3,485,796 to 3,486,056
_3242
Dsui_3243: Dsui_3243 - clan AA aspartic protease, TIGR02281 family, at 3,486,078 to 3,486,728
_3243
Dsui_3244: Dsui_3244 - GMP synthase family protein, at 3,486,751 to 3,487,461
_3244
Dsui_3245: Dsui_3245 - hypothetical protein, at 3,487,528 to 3,488,022
_3245
Dsui_3246: Dsui_3246 - hypothetical protein, at 3,488,035 to 3,488,349
_3246
Dsui_3247: Dsui_3247 - Protein of unknown function (DUF2788), at 3,488,349 to 3,488,570
_3247
Position (kb)
3486
3487
3488 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3485.776 kb on + strand at 3485.840 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3486.006 kb on - strand, within Dsui_3242 at 3486.006 kb on - strand, within Dsui_3242 at 3486.008 kb on + strand, within Dsui_3242 at 3486.027 kb on - strand, within Dsui_3242 at 3486.073 kb on - strand at 3486.073 kb on - strand at 3486.097 kb on + strand at 3486.105 kb on - strand at 3486.163 kb on - strand, within Dsui_3243 at 3486.174 kb on + strand, within Dsui_3243 at 3486.182 kb on - strand, within Dsui_3243 at 3486.236 kb on - strand, within Dsui_3243 at 3486.246 kb on - strand, within Dsui_3243 at 3486.300 kb on - strand, within Dsui_3243 at 3486.349 kb on - strand, within Dsui_3243 at 3486.431 kb on + strand, within Dsui_3243 at 3486.431 kb on + strand, within Dsui_3243 at 3486.437 kb on + strand, within Dsui_3243 at 3486.439 kb on - strand, within Dsui_3243 at 3486.445 kb on - strand, within Dsui_3243 at 3486.445 kb on - strand, within Dsui_3243 at 3486.474 kb on + strand, within Dsui_3243 at 3486.493 kb on - strand, within Dsui_3243 at 3486.539 kb on - strand, within Dsui_3243 at 3486.555 kb on + strand, within Dsui_3243 at 3486.578 kb on + strand, within Dsui_3243 at 3486.614 kb on + strand, within Dsui_3243 at 3486.696 kb on - strand at 3486.707 kb on + strand at 3486.710 kb on - strand at 3486.833 kb on + strand, within Dsui_3244 at 3486.841 kb on - strand, within Dsui_3244 at 3486.841 kb on - strand, within Dsui_3244 at 3486.841 kb on - strand, within Dsui_3244 at 3486.841 kb on - strand, within Dsui_3244 at 3486.841 kb on - strand, within Dsui_3244 at 3486.910 kb on - strand, within Dsui_3244 at 3486.939 kb on + strand, within Dsui_3244 at 3486.949 kb on + strand, within Dsui_3244 at 3486.956 kb on + strand, within Dsui_3244 at 3486.956 kb on + strand, within Dsui_3244 at 3486.956 kb on + strand, within Dsui_3244 at 3486.956 kb on + strand, within Dsui_3244 at 3486.964 kb on - strand, within Dsui_3244 at 3487.036 kb on + strand, within Dsui_3244 at 3487.092 kb on - strand, within Dsui_3244 at 3487.094 kb on + strand, within Dsui_3244 at 3487.094 kb on + strand, within Dsui_3244 at 3487.102 kb on - strand, within Dsui_3244 at 3487.132 kb on - strand, within Dsui_3244 at 3487.177 kb on - strand, within Dsui_3244 at 3487.188 kb on + strand, within Dsui_3244 at 3487.196 kb on - strand, within Dsui_3244 at 3487.251 kb on + strand, within Dsui_3244 at 3487.252 kb on + strand, within Dsui_3244 at 3487.371 kb on - strand, within Dsui_3244 at 3487.464 kb on + strand at 3487.592 kb on - strand, within Dsui_3245 at 3487.739 kb on + strand, within Dsui_3245 at 3487.835 kb on + strand, within Dsui_3245 at 3487.835 kb on + strand, within Dsui_3245 at 3487.835 kb on + strand, within Dsui_3245 at 3487.835 kb on + strand, within Dsui_3245 at 3487.835 kb on + strand, within Dsui_3245 at 3487.835 kb on + strand, within Dsui_3245 at 3487.835 kb on + strand, within Dsui_3245 at 3487.835 kb on + strand, within Dsui_3245 at 3487.835 kb on + strand, within Dsui_3245 at 3487.835 kb on + strand, within Dsui_3245 at 3487.843 kb on - strand, within Dsui_3245 at 3487.843 kb on - strand, within Dsui_3245 at 3487.843 kb on - strand, within Dsui_3245 at 3487.843 kb on - strand, within Dsui_3245 at 3488.035 kb on - strand at 3488.142 kb on - strand, within Dsui_3246 at 3488.191 kb on + strand, within Dsui_3246 at 3488.193 kb on - strand, within Dsui_3246 at 3488.223 kb on - strand, within Dsui_3246 at 3488.288 kb on - strand, within Dsui_3246 at 3488.300 kb on + strand, within Dsui_3246 at 3488.308 kb on - strand, within Dsui_3246 at 3488.308 kb on - strand, within Dsui_3246 at 3488.323 kb on - strand at 3488.407 kb on - strand, within Dsui_3247 at 3488.431 kb on + strand, within Dsui_3247 at 3488.438 kb on - strand, within Dsui_3247
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Chloride 75 mM remove 3,485,776 + -0.6 3,485,840 + Dsui_3242 0.17 -0.6 3,485,998 + Dsui_3242 0.77 -0.6 3,485,998 + Dsui_3242 0.77 -0.6 3,485,998 + Dsui_3242 0.77 -2.0 3,485,998 + Dsui_3242 0.77 +0.4 3,486,006 - Dsui_3242 0.80 -0.4 3,486,006 - Dsui_3242 0.80 +0.1 3,486,008 + Dsui_3242 0.81 -1.2 3,486,027 - Dsui_3242 0.89 -0.2 3,486,073 - -0.3 3,486,073 - -0.0 3,486,097 + -2.2 3,486,105 - -0.2 3,486,163 - Dsui_3243 0.13 -0.3 3,486,174 + Dsui_3243 0.15 -2.0 3,486,182 - Dsui_3243 0.16 -0.2 3,486,236 - Dsui_3243 0.24 +0.0 3,486,246 - Dsui_3243 0.26 -0.1 3,486,300 - Dsui_3243 0.34 -0.3 3,486,349 - Dsui_3243 0.42 +0.0 3,486,431 + Dsui_3243 0.54 -0.6 3,486,431 + Dsui_3243 0.54 -1.2 3,486,437 + Dsui_3243 0.55 -1.2 3,486,439 - Dsui_3243 0.55 +0.3 3,486,445 - Dsui_3243 0.56 +0.5 3,486,445 - Dsui_3243 0.56 -0.5 3,486,474 + Dsui_3243 0.61 +0.4 3,486,493 - Dsui_3243 0.64 -0.5 3,486,539 - Dsui_3243 0.71 +0.1 3,486,555 + Dsui_3243 0.73 -2.0 3,486,578 + Dsui_3243 0.77 +0.4 3,486,614 + Dsui_3243 0.82 -0.6 3,486,696 - -0.1 3,486,707 + -2.0 3,486,710 - -0.1 3,486,833 + Dsui_3244 0.12 -1.7 3,486,841 - Dsui_3244 0.13 -3.2 3,486,841 - Dsui_3244 0.13 -0.7 3,486,841 - Dsui_3244 0.13 +0.3 3,486,841 - Dsui_3244 0.13 -1.2 3,486,841 - Dsui_3244 0.13 -0.7 3,486,910 - Dsui_3244 0.22 -1.2 3,486,939 + Dsui_3244 0.26 -1.5 3,486,949 + Dsui_3244 0.28 -0.5 3,486,956 + Dsui_3244 0.29 +1.1 3,486,956 + Dsui_3244 0.29 -0.7 3,486,956 + Dsui_3244 0.29 -0.1 3,486,956 + Dsui_3244 0.29 +1.0 3,486,964 - Dsui_3244 0.30 +0.3 3,487,036 + Dsui_3244 0.40 -2.0 3,487,092 - Dsui_3244 0.48 -0.2 3,487,094 + Dsui_3244 0.48 -0.7 3,487,094 + Dsui_3244 0.48 -0.7 3,487,102 - Dsui_3244 0.49 -0.3 3,487,132 - Dsui_3244 0.54 -2.7 3,487,177 - Dsui_3244 0.60 -2.6 3,487,188 + Dsui_3244 0.61 -0.7 3,487,196 - Dsui_3244 0.63 -1.2 3,487,251 + Dsui_3244 0.70 +0.3 3,487,252 + Dsui_3244 0.70 +0.3 3,487,371 - Dsui_3244 0.87 -0.3 3,487,464 + -1.7 3,487,592 - Dsui_3245 0.13 -0.0 3,487,739 + Dsui_3245 0.43 +0.3 3,487,835 + Dsui_3245 0.62 +0.3 3,487,835 + Dsui_3245 0.62 -0.7 3,487,835 + Dsui_3245 0.62 +0.3 3,487,835 + Dsui_3245 0.62 -2.0 3,487,835 + Dsui_3245 0.62 -0.7 3,487,835 + Dsui_3245 0.62 +0.3 3,487,835 + Dsui_3245 0.62 +0.3 3,487,835 + Dsui_3245 0.62 +0.3 3,487,835 + Dsui_3245 0.62 -2.0 3,487,835 + Dsui_3245 0.62 +0.3 3,487,843 - Dsui_3245 0.64 +0.0 3,487,843 - Dsui_3245 0.64 -0.2 3,487,843 - Dsui_3245 0.64 +0.2 3,487,843 - Dsui_3245 0.64 -0.1 3,488,035 - -0.2 3,488,142 - Dsui_3246 0.34 +0.2 3,488,191 + Dsui_3246 0.50 -1.6 3,488,193 - Dsui_3246 0.50 -0.2 3,488,223 - Dsui_3246 0.60 +0.1 3,488,288 - Dsui_3246 0.80 +0.3 3,488,300 + Dsui_3246 0.84 -0.6 3,488,308 - Dsui_3246 0.87 +0.2 3,488,308 - Dsui_3246 0.87 +0.2 3,488,323 - +0.4 3,488,407 - Dsui_3247 0.26 +0.5 3,488,431 + Dsui_3247 0.37 -0.6 3,488,438 - Dsui_3247 0.40 +0.5
Or see this region's nucleotide sequence