Experiment: ALP with Chloride 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3157 and Dsui_3158 are separated by 78 nucleotides Dsui_3158 and Dsui_3159 are separated by 180 nucleotides
Dsui_3157: Dsui_3157 - Fatty acid cis/trans isomerase (CTI), at 3,379,501 to 3,381,852
_3157
Dsui_3158: Dsui_3158 - Na+/H+ dicarboxylate symporter, at 3,381,931 to 3,383,277
_3158
Dsui_3159: Dsui_3159 - PAS domain S-box, at 3,383,458 to 3,385,446
_3159
Position (kb)
3381
3382
3383
3384 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3381.034 kb on + strand, within Dsui_3157 at 3381.168 kb on + strand, within Dsui_3157 at 3381.432 kb on + strand, within Dsui_3157 at 3381.453 kb on - strand at 3381.480 kb on + strand, within Dsui_3157 at 3381.583 kb on + strand, within Dsui_3157 at 3381.601 kb on - strand, within Dsui_3157 at 3381.678 kb on + strand at 3381.728 kb on + strand at 3381.728 kb on + strand at 3381.728 kb on + strand at 3381.728 kb on + strand at 3381.736 kb on - strand at 3381.736 kb on - strand at 3381.802 kb on + strand at 3381.834 kb on - strand at 3381.834 kb on - strand at 3381.926 kb on - strand at 3381.992 kb on + strand at 3381.993 kb on - strand at 3382.162 kb on + strand, within Dsui_3158 at 3382.282 kb on - strand, within Dsui_3158 at 3382.308 kb on - strand, within Dsui_3158 at 3382.358 kb on - strand, within Dsui_3158 at 3382.379 kb on - strand, within Dsui_3158 at 3382.505 kb on - strand, within Dsui_3158 at 3382.588 kb on + strand, within Dsui_3158 at 3382.663 kb on - strand, within Dsui_3158 at 3382.701 kb on - strand, within Dsui_3158 at 3382.776 kb on + strand, within Dsui_3158 at 3382.818 kb on - strand, within Dsui_3158 at 3382.870 kb on - strand, within Dsui_3158 at 3382.900 kb on - strand, within Dsui_3158 at 3383.059 kb on - strand, within Dsui_3158 at 3383.100 kb on + strand, within Dsui_3158 at 3383.143 kb on - strand at 3383.168 kb on + strand at 3383.223 kb on - strand at 3383.410 kb on - strand at 3383.446 kb on + strand at 3383.489 kb on + strand at 3383.576 kb on - strand at 3383.669 kb on + strand, within Dsui_3159 at 3383.701 kb on - strand, within Dsui_3159 at 3383.764 kb on + strand, within Dsui_3159 at 3383.829 kb on - strand at 3383.857 kb on + strand, within Dsui_3159 at 3384.062 kb on - strand, within Dsui_3159 at 3384.154 kb on - strand, within Dsui_3159 at 3384.251 kb on - strand, within Dsui_3159
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Chloride 75 mM remove 3,381,034 + Dsui_3157 0.65 +0.3 3,381,168 + Dsui_3157 0.71 -3.1 3,381,432 + Dsui_3157 0.82 +0.3 3,381,453 - +0.3 3,381,480 + Dsui_3157 0.84 +0.3 3,381,583 + Dsui_3157 0.89 +0.3 3,381,601 - Dsui_3157 0.89 -1.7 3,381,678 + +1.8 3,381,728 + -2.1 3,381,728 + -1.3 3,381,728 + -1.3 3,381,728 + -2.1 3,381,736 - -0.7 3,381,736 - +0.3 3,381,802 + -0.7 3,381,834 - -0.7 3,381,834 - +0.3 3,381,926 - -2.1 3,381,992 + -0.7 3,381,993 - -1.5 3,382,162 + Dsui_3158 0.17 -2.1 3,382,282 - Dsui_3158 0.26 -1.1 3,382,308 - Dsui_3158 0.28 +0.3 3,382,358 - Dsui_3158 0.32 -0.7 3,382,379 - Dsui_3158 0.33 -2.4 3,382,505 - Dsui_3158 0.43 -1.1 3,382,588 + Dsui_3158 0.49 +0.3 3,382,663 - Dsui_3158 0.54 -3.2 3,382,701 - Dsui_3158 0.57 +0.3 3,382,776 + Dsui_3158 0.63 -0.7 3,382,818 - Dsui_3158 0.66 -2.1 3,382,870 - Dsui_3158 0.70 -0.7 3,382,900 - Dsui_3158 0.72 -2.3 3,383,059 - Dsui_3158 0.84 -1.5 3,383,100 + Dsui_3158 0.87 +0.3 3,383,143 - -2.2 3,383,168 + -1.3 3,383,223 - -2.2 3,383,410 - -1.7 3,383,446 + +0.5 3,383,489 + -2.0 3,383,576 - -0.7 3,383,669 + Dsui_3159 0.11 +0.4 3,383,701 - Dsui_3159 0.12 -1.7 3,383,764 + Dsui_3159 0.15 -0.3 3,383,829 - +0.3 3,383,857 + Dsui_3159 0.20 -1.2 3,384,062 - Dsui_3159 0.30 -0.7 3,384,154 - Dsui_3159 0.35 +0.3 3,384,251 - Dsui_3159 0.40 -1.3
Or see this region's nucleotide sequence