Experiment: ALP with Chloride 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3148 and Dsui_3149 are separated by 9 nucleotides Dsui_3149 and Dsui_3150 overlap by 8 nucleotides Dsui_3150 and Dsui_3151 are separated by 25 nucleotides
Dsui_3148: Dsui_3148 - flavin-dependent dehydrogenase, at 3,369,636 to 3,370,946
_3148
Dsui_3149: Dsui_3149 - electron transfer flavoprotein, alpha subunit, at 3,370,956 to 3,372,038
_3149
Dsui_3150: Dsui_3150 - electron transfer flavoprotein, beta subunit, at 3,372,031 to 3,372,915
_3150
Dsui_3151: Dsui_3151 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 3,372,941 to 3,373,630
_3151
Position (kb)
3370
3371
3372
3373 Strain fitness (log2 ratio)
-2
-1
0
1 at 3369.991 kb on - strand, within Dsui_3148 at 3369.991 kb on - strand, within Dsui_3148 at 3370.080 kb on + strand, within Dsui_3148 at 3370.110 kb on - strand, within Dsui_3148 at 3370.128 kb on + strand at 3370.191 kb on - strand, within Dsui_3148 at 3370.218 kb on + strand at 3370.226 kb on - strand, within Dsui_3148 at 3370.226 kb on - strand, within Dsui_3148 at 3370.257 kb on - strand, within Dsui_3148 at 3370.285 kb on + strand at 3370.531 kb on + strand at 3370.638 kb on - strand, within Dsui_3148 at 3370.869 kb on - strand at 3370.871 kb on + strand at 3370.935 kb on + strand at 3370.970 kb on - strand at 3370.995 kb on + strand at 3371.003 kb on - strand at 3371.205 kb on + strand at 3371.251 kb on + strand, within Dsui_3149 at 3371.306 kb on - strand, within Dsui_3149 at 3371.435 kb on + strand at 3371.438 kb on - strand, within Dsui_3149 at 3371.564 kb on - strand, within Dsui_3149 at 3371.663 kb on + strand at 3371.869 kb on - strand at 3371.900 kb on - strand, within Dsui_3149 at 3372.045 kb on + strand at 3372.070 kb on - strand at 3372.133 kb on - strand, within Dsui_3150 at 3372.135 kb on - strand at 3372.135 kb on - strand, within Dsui_3150 at 3372.157 kb on - strand, within Dsui_3150 at 3372.521 kb on - strand at 3372.523 kb on + strand at 3372.560 kb on + strand, within Dsui_3150 at 3372.727 kb on - strand, within Dsui_3150 at 3372.744 kb on + strand, within Dsui_3150 at 3372.817 kb on - strand, within Dsui_3150 at 3373.008 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Chloride 75 mM remove 3,369,991 - Dsui_3148 0.27 +0.3 3,369,991 - Dsui_3148 0.27 +0.3 3,370,080 + Dsui_3148 0.34 +1.3 3,370,110 - Dsui_3148 0.36 -1.7 3,370,128 + +0.3 3,370,191 - Dsui_3148 0.42 -1.3 3,370,218 + -1.3 3,370,226 - Dsui_3148 0.45 +0.3 3,370,226 - Dsui_3148 0.45 -0.7 3,370,257 - Dsui_3148 0.47 -0.7 3,370,285 + +0.3 3,370,531 + -0.7 3,370,638 - Dsui_3148 0.76 -0.7 3,370,869 - -0.7 3,370,871 + -1.3 3,370,935 + -1.3 3,370,970 - -0.7 3,370,995 + -0.7 3,371,003 - +0.3 3,371,205 + +0.3 3,371,251 + Dsui_3149 0.27 -1.7 3,371,306 - Dsui_3149 0.32 -0.7 3,371,435 + -0.7 3,371,438 - Dsui_3149 0.45 -1.3 3,371,564 - Dsui_3149 0.56 -0.7 3,371,663 + -0.7 3,371,869 - +0.3 3,371,900 - Dsui_3149 0.87 -1.3 3,372,045 + -0.7 3,372,070 - +0.3 3,372,133 - Dsui_3150 0.12 +0.3 3,372,135 - +0.3 3,372,135 - Dsui_3150 0.12 +0.3 3,372,157 - Dsui_3150 0.14 -1.3 3,372,521 - +0.3 3,372,523 + -1.3 3,372,560 + Dsui_3150 0.60 -1.3 3,372,727 - Dsui_3150 0.79 -2.3 3,372,744 + Dsui_3150 0.81 -1.3 3,372,817 - Dsui_3150 0.89 -0.7 3,373,008 - +0.3
Or see this region's nucleotide sequence