Experiment: ALP with Chloride 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3072 and Dsui_3073 are separated by 3 nucleotides Dsui_3073 and Dsui_3074 are separated by 128 nucleotides
Dsui_3072: Dsui_3072 - DNA repair protein RecN, at 3,287,070 to 3,288,725
_3072
Dsui_3073: Dsui_3073 - putative sugar kinase, at 3,288,729 to 3,289,607
_3073
Dsui_3074: Dsui_3074 - heat shock gene repressor HrcA, at 3,289,736 to 3,290,764
_3074
Position (kb)
3288
3289
3290 Strain fitness (log2 ratio)
-1
0
1 at 3287.922 kb on - strand, within Dsui_3072 at 3287.950 kb on - strand, within Dsui_3072 at 3287.986 kb on + strand at 3287.999 kb on - strand, within Dsui_3072 at 3288.130 kb on + strand at 3288.406 kb on + strand, within Dsui_3072 at 3288.517 kb on - strand, within Dsui_3072 at 3288.544 kb on - strand, within Dsui_3072 at 3288.727 kb on + strand at 3288.735 kb on - strand at 3289.636 kb on - strand at 3289.762 kb on + strand at 3289.783 kb on + strand at 3289.907 kb on + strand, within Dsui_3074 at 3289.907 kb on + strand, within Dsui_3074 at 3289.937 kb on + strand, within Dsui_3074 at 3290.023 kb on + strand, within Dsui_3074 at 3290.058 kb on + strand, within Dsui_3074 at 3290.159 kb on + strand, within Dsui_3074 at 3290.195 kb on - strand at 3290.278 kb on + strand, within Dsui_3074 at 3290.375 kb on - strand, within Dsui_3074 at 3290.411 kb on + strand, within Dsui_3074 at 3290.414 kb on - strand, within Dsui_3074 at 3290.489 kb on + strand, within Dsui_3074 at 3290.497 kb on - strand, within Dsui_3074 at 3290.507 kb on - strand, within Dsui_3074 at 3290.563 kb on + strand, within Dsui_3074
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Chloride 75 mM remove 3,287,922 - Dsui_3072 0.51 -0.3 3,287,950 - Dsui_3072 0.53 -0.4 3,287,986 + +0.3 3,287,999 - Dsui_3072 0.56 +0.3 3,288,130 + +0.3 3,288,406 + Dsui_3072 0.81 +0.3 3,288,517 - Dsui_3072 0.87 -0.2 3,288,544 - Dsui_3072 0.89 -0.5 3,288,727 + +1.3 3,288,735 - -0.0 3,289,636 - -0.1 3,289,762 + -0.5 3,289,783 + -0.6 3,289,907 + Dsui_3074 0.17 -1.1 3,289,907 + Dsui_3074 0.17 -0.5 3,289,937 + Dsui_3074 0.20 -0.2 3,290,023 + Dsui_3074 0.28 -0.8 3,290,058 + Dsui_3074 0.31 -0.5 3,290,159 + Dsui_3074 0.41 -0.2 3,290,195 - +0.3 3,290,278 + Dsui_3074 0.53 -0.4 3,290,375 - Dsui_3074 0.62 -0.7 3,290,411 + Dsui_3074 0.66 -0.6 3,290,414 - Dsui_3074 0.66 +0.3 3,290,489 + Dsui_3074 0.73 -0.4 3,290,497 - Dsui_3074 0.74 +0.3 3,290,507 - Dsui_3074 0.75 +0.3 3,290,563 + Dsui_3074 0.80 -0.4
Or see this region's nucleotide sequence