Experiment: ALP with Chloride 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1099 and Dsui_1100 are separated by 9 nucleotides Dsui_1100 and Dsui_1101 are separated by 3 nucleotides Dsui_1101 and Dsui_1102 are separated by 81 nucleotides
Dsui_1099: Dsui_1099 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase, at 1,142,307 to 1,143,665
_1099
Dsui_1100: Dsui_1100 - hypothetical protein, at 1,143,675 to 1,143,983
_1100
Dsui_1101: Dsui_1101 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing, at 1,143,987 to 1,145,813
_1101
Dsui_1102: Dsui_1102 - hypothetical protein, at 1,145,895 to 1,146,902
_1102
Position (kb)
1143
1144
1145
1146 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1145.934 kb on - strand at 1145.996 kb on - strand, within Dsui_1102 at 1146.123 kb on - strand, within Dsui_1102 at 1146.170 kb on + strand, within Dsui_1102 at 1146.175 kb on + strand, within Dsui_1102 at 1146.175 kb on + strand, within Dsui_1102 at 1146.183 kb on - strand, within Dsui_1102 at 1146.185 kb on + strand, within Dsui_1102 at 1146.206 kb on + strand, within Dsui_1102 at 1146.214 kb on - strand, within Dsui_1102 at 1146.214 kb on - strand, within Dsui_1102 at 1146.214 kb on - strand, within Dsui_1102 at 1146.214 kb on - strand, within Dsui_1102 at 1146.329 kb on + strand, within Dsui_1102 at 1146.382 kb on - strand, within Dsui_1102 at 1146.681 kb on + strand, within Dsui_1102 at 1146.683 kb on + strand, within Dsui_1102 at 1146.691 kb on - strand, within Dsui_1102 at 1146.725 kb on - strand, within Dsui_1102 at 1146.728 kb on + strand, within Dsui_1102 at 1146.736 kb on - strand, within Dsui_1102 at 1146.736 kb on - strand, within Dsui_1102 at 1146.753 kb on - strand, within Dsui_1102
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Chloride 75 mM remove 1,145,934 - +0.8 1,145,996 - Dsui_1102 0.10 -0.5 1,146,123 - Dsui_1102 0.23 -1.4 1,146,170 + Dsui_1102 0.27 +0.1 1,146,175 + Dsui_1102 0.28 -0.1 1,146,175 + Dsui_1102 0.28 -0.5 1,146,183 - Dsui_1102 0.29 +0.3 1,146,185 + Dsui_1102 0.29 -0.1 1,146,206 + Dsui_1102 0.31 -0.1 1,146,214 - Dsui_1102 0.32 -1.8 1,146,214 - Dsui_1102 0.32 -1.3 1,146,214 - Dsui_1102 0.32 -1.3 1,146,214 - Dsui_1102 0.32 +0.3 1,146,329 + Dsui_1102 0.43 +0.0 1,146,382 - Dsui_1102 0.48 -1.7 1,146,681 + Dsui_1102 0.78 -0.4 1,146,683 + Dsui_1102 0.78 -1.3 1,146,691 - Dsui_1102 0.79 -0.7 1,146,725 - Dsui_1102 0.82 +0.3 1,146,728 + Dsui_1102 0.83 +0.5 1,146,736 - Dsui_1102 0.83 -3.1 1,146,736 - Dsui_1102 0.83 -1.7 1,146,753 - Dsui_1102 0.85 +0.3
Or see this region's nucleotide sequence