Experiment: ALP with Chloride 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1076 and Dsui_1077 are separated by 104 nucleotides Dsui_1077 and Dsui_1078 are separated by 742 nucleotides
Dsui_1076: Dsui_1076 - copper/silver-translocating P-type ATPase, at 1,111,333 to 1,113,615
_1076
Dsui_1077: Dsui_1077 - hypothetical protein, at 1,113,720 to 1,113,974
_1077
Dsui_1078: Dsui_1078 - Protein of unknown function (DUF2933), at 1,114,717 to 1,114,983
_1078
Position (kb)
1113
1114 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1112.721 kb on + strand, within Dsui_1076 at 1112.770 kb on - strand, within Dsui_1076 at 1112.770 kb on - strand, within Dsui_1076 at 1112.812 kb on + strand, within Dsui_1076 at 1112.825 kb on + strand, within Dsui_1076 at 1112.905 kb on + strand, within Dsui_1076 at 1112.923 kb on - strand, within Dsui_1076 at 1112.928 kb on - strand, within Dsui_1076 at 1112.939 kb on + strand, within Dsui_1076 at 1112.947 kb on - strand, within Dsui_1076 at 1112.947 kb on - strand, within Dsui_1076 at 1112.952 kb on + strand, within Dsui_1076 at 1112.960 kb on - strand, within Dsui_1076 at 1112.985 kb on + strand, within Dsui_1076 at 1113.076 kb on - strand, within Dsui_1076 at 1113.278 kb on + strand, within Dsui_1076 at 1113.288 kb on + strand, within Dsui_1076 at 1113.288 kb on + strand, within Dsui_1076 at 1113.288 kb on + strand, within Dsui_1076 at 1113.288 kb on + strand, within Dsui_1076 at 1113.291 kb on - strand, within Dsui_1076 at 1113.301 kb on - strand, within Dsui_1076 at 1113.307 kb on - strand, within Dsui_1076 at 1113.323 kb on + strand, within Dsui_1076 at 1113.327 kb on + strand, within Dsui_1076 at 1113.327 kb on + strand, within Dsui_1076 at 1113.331 kb on - strand, within Dsui_1076 at 1113.351 kb on + strand, within Dsui_1076 at 1113.359 kb on - strand, within Dsui_1076 at 1113.380 kb on + strand, within Dsui_1076 at 1113.388 kb on - strand at 1113.399 kb on + strand at 1113.407 kb on - strand at 1113.407 kb on - strand at 1113.434 kb on + strand at 1113.453 kb on + strand at 1113.460 kb on + strand at 1113.461 kb on - strand at 1113.467 kb on - strand at 1113.467 kb on - strand at 1113.505 kb on + strand at 1113.546 kb on + strand at 1113.554 kb on - strand at 1113.575 kb on + strand at 1113.575 kb on - strand at 1113.575 kb on - strand at 1113.583 kb on - strand at 1113.659 kb on + strand at 1113.752 kb on + strand, within Dsui_1077 at 1113.798 kb on + strand, within Dsui_1077 at 1113.800 kb on - strand, within Dsui_1077 at 1113.834 kb on + strand, within Dsui_1077 at 1113.863 kb on + strand, within Dsui_1077 at 1113.871 kb on - strand, within Dsui_1077 at 1113.905 kb on + strand, within Dsui_1077 at 1113.918 kb on - strand, within Dsui_1077 at 1113.983 kb on + strand at 1113.983 kb on + strand at 1113.983 kb on + strand at 1113.983 kb on + strand at 1113.983 kb on + strand at 1113.983 kb on + strand at 1113.993 kb on + strand at 1114.048 kb on + strand at 1114.048 kb on + strand at 1114.062 kb on + strand at 1114.079 kb on + strand at 1114.132 kb on - strand at 1114.132 kb on - strand at 1114.132 kb on - strand at 1114.132 kb on - strand at 1114.135 kb on + strand at 1114.148 kb on - strand at 1114.164 kb on + strand at 1114.164 kb on + strand at 1114.187 kb on + strand at 1114.187 kb on + strand at 1114.195 kb on - strand at 1114.231 kb on + strand at 1114.263 kb on - strand at 1114.287 kb on + strand at 1114.287 kb on - strand at 1114.314 kb on + strand at 1114.314 kb on + strand at 1114.328 kb on - strand at 1114.375 kb on + strand at 1114.419 kb on - strand at 1114.424 kb on + strand at 1114.461 kb on + strand at 1114.461 kb on + strand at 1114.464 kb on - strand at 1114.469 kb on - strand at 1114.474 kb on - strand at 1114.484 kb on + strand at 1114.492 kb on - strand at 1114.502 kb on + strand at 1114.502 kb on + strand at 1114.505 kb on - strand at 1114.510 kb on - strand at 1114.512 kb on + strand at 1114.520 kb on - strand at 1114.520 kb on - strand at 1114.520 kb on - strand at 1114.520 kb on - strand at 1114.521 kb on - strand at 1114.522 kb on + strand at 1114.523 kb on + strand at 1114.523 kb on + strand at 1114.523 kb on + strand at 1114.523 kb on + strand at 1114.531 kb on - strand at 1114.541 kb on - strand at 1114.542 kb on + strand at 1114.552 kb on - strand at 1114.562 kb on - strand at 1114.567 kb on - strand at 1114.569 kb on + strand at 1114.569 kb on + strand at 1114.577 kb on - strand at 1114.590 kb on + strand at 1114.593 kb on - strand at 1114.600 kb on + strand at 1114.600 kb on + strand at 1114.600 kb on + strand at 1114.600 kb on + strand at 1114.608 kb on - strand at 1114.608 kb on - strand at 1114.610 kb on + strand at 1114.612 kb on + strand at 1114.613 kb on - strand at 1114.620 kb on + strand at 1114.620 kb on - strand at 1114.661 kb on + strand at 1114.678 kb on + strand at 1114.678 kb on + strand at 1114.678 kb on + strand at 1114.678 kb on + strand at 1114.686 kb on - strand at 1114.700 kb on + strand at 1114.700 kb on + strand at 1114.708 kb on - strand at 1114.733 kb on + strand at 1114.737 kb on - strand at 1114.740 kb on + strand at 1114.740 kb on + strand at 1114.740 kb on + strand at 1114.740 kb on + strand at 1114.743 kb on + strand at 1114.745 kb on + strand, within Dsui_1078 at 1114.746 kb on - strand, within Dsui_1078 at 1114.746 kb on - strand, within Dsui_1078 at 1114.748 kb on + strand, within Dsui_1078 at 1114.750 kb on + strand, within Dsui_1078 at 1114.751 kb on - strand, within Dsui_1078 at 1114.754 kb on - strand, within Dsui_1078 at 1114.789 kb on - strand, within Dsui_1078 at 1114.807 kb on + strand, within Dsui_1078 at 1114.807 kb on + strand, within Dsui_1078 at 1114.815 kb on - strand, within Dsui_1078 at 1114.822 kb on - strand, within Dsui_1078 at 1114.824 kb on + strand, within Dsui_1078 at 1114.831 kb on + strand, within Dsui_1078 at 1114.831 kb on + strand, within Dsui_1078 at 1114.831 kb on + strand, within Dsui_1078 at 1114.831 kb on + strand, within Dsui_1078 at 1114.831 kb on + strand, within Dsui_1078 at 1114.839 kb on - strand, within Dsui_1078 at 1114.839 kb on - strand, within Dsui_1078 at 1114.852 kb on + strand, within Dsui_1078 at 1114.857 kb on + strand, within Dsui_1078 at 1114.858 kb on - strand, within Dsui_1078 at 1114.860 kb on - strand, within Dsui_1078 at 1114.865 kb on - strand, within Dsui_1078 at 1114.865 kb on - strand, within Dsui_1078 at 1114.869 kb on + strand, within Dsui_1078 at 1114.875 kb on + strand, within Dsui_1078 at 1114.877 kb on - strand, within Dsui_1078 at 1114.880 kb on + strand, within Dsui_1078 at 1114.883 kb on + strand, within Dsui_1078 at 1114.883 kb on + strand, within Dsui_1078 at 1114.883 kb on - strand, within Dsui_1078 at 1114.909 kb on + strand, within Dsui_1078 at 1114.910 kb on - strand, within Dsui_1078 at 1114.916 kb on - strand, within Dsui_1078 at 1114.917 kb on - strand, within Dsui_1078 at 1114.921 kb on + strand, within Dsui_1078 at 1114.921 kb on + strand, within Dsui_1078 at 1114.922 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.929 kb on + strand, within Dsui_1078 at 1114.929 kb on - strand, within Dsui_1078 at 1114.932 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.942 kb on + strand, within Dsui_1078 at 1114.942 kb on - strand, within Dsui_1078 at 1114.950 kb on - strand, within Dsui_1078 at 1114.957 kb on + strand at 1114.957 kb on + strand at 1114.957 kb on + strand at 1114.957 kb on + strand at 1114.965 kb on + strand at 1114.970 kb on + strand at 1114.973 kb on - strand at 1114.973 kb on - strand at 1114.973 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Chloride 75 mM remove 1,112,721 + Dsui_1076 0.61 -1.6 1,112,770 - Dsui_1076 0.63 -1.4 1,112,770 - Dsui_1076 0.63 -3.4 1,112,812 + Dsui_1076 0.65 -0.4 1,112,825 + Dsui_1076 0.65 -0.0 1,112,905 + Dsui_1076 0.69 +0.1 1,112,923 - Dsui_1076 0.70 +0.4 1,112,928 - Dsui_1076 0.70 +0.4 1,112,939 + Dsui_1076 0.70 +0.4 1,112,947 - Dsui_1076 0.71 +0.4 1,112,947 - Dsui_1076 0.71 +0.4 1,112,952 + Dsui_1076 0.71 -0.4 1,112,960 - Dsui_1076 0.71 -2.2 1,112,985 + Dsui_1076 0.72 -0.6 1,113,076 - Dsui_1076 0.76 +0.4 1,113,278 + Dsui_1076 0.85 -1.2 1,113,288 + Dsui_1076 0.86 -1.0 1,113,288 + Dsui_1076 0.86 -1.8 1,113,288 + Dsui_1076 0.86 +0.2 1,113,288 + Dsui_1076 0.86 -0.2 1,113,291 - Dsui_1076 0.86 -2.4 1,113,301 - Dsui_1076 0.86 -3.1 1,113,307 - Dsui_1076 0.86 -0.6 1,113,323 + Dsui_1076 0.87 -0.2 1,113,327 + Dsui_1076 0.87 +0.1 1,113,327 + Dsui_1076 0.87 +0.1 1,113,331 - Dsui_1076 0.88 -0.2 1,113,351 + Dsui_1076 0.88 -0.4 1,113,359 - Dsui_1076 0.89 -1.2 1,113,380 + Dsui_1076 0.90 -0.3 1,113,388 - -0.6 1,113,399 + +0.1 1,113,407 - +0.4 1,113,407 - -1.6 1,113,434 + -0.4 1,113,453 + +0.4 1,113,460 + +0.4 1,113,461 - -1.6 1,113,467 - +0.4 1,113,467 - -1.6 1,113,505 + -1.0 1,113,546 + +0.4 1,113,554 - +0.4 1,113,575 + -0.6 1,113,575 - -1.2 1,113,575 - -2.0 1,113,583 - +0.4 1,113,659 + -1.0 1,113,752 + Dsui_1077 0.13 -1.2 1,113,798 + Dsui_1077 0.31 -1.2 1,113,800 - Dsui_1077 0.31 -1.2 1,113,834 + Dsui_1077 0.45 +0.4 1,113,863 + Dsui_1077 0.56 -1.2 1,113,871 - Dsui_1077 0.59 +0.4 1,113,905 + Dsui_1077 0.73 -2.2 1,113,918 - Dsui_1077 0.78 +0.4 1,113,983 + -0.4 1,113,983 + -1.6 1,113,983 + -1.0 1,113,983 + -0.7 1,113,983 + +0.1 1,113,983 + -1.6 1,113,993 + -1.3 1,114,048 + -1.2 1,114,048 + -0.2 1,114,062 + +1.4 1,114,079 + -0.2 1,114,132 - -1.6 1,114,132 - -0.6 1,114,132 - -2.4 1,114,132 - -0.6 1,114,135 + -0.6 1,114,148 - -1.2 1,114,164 + +1.3 1,114,164 + -0.9 1,114,187 + -0.3 1,114,187 + -1.2 1,114,195 - -1.2 1,114,231 + -1.2 1,114,263 - +0.4 1,114,287 + +0.4 1,114,287 - -2.0 1,114,314 + -0.6 1,114,314 + -0.1 1,114,328 - +0.4 1,114,375 + -1.4 1,114,419 - -1.2 1,114,424 + -0.2 1,114,461 + -1.2 1,114,461 + +0.4 1,114,464 - +0.4 1,114,469 - +0.4 1,114,474 - -1.2 1,114,484 + -1.4 1,114,492 - -2.2 1,114,502 + +0.4 1,114,502 + +0.4 1,114,505 - -0.6 1,114,510 - +0.4 1,114,512 + -1.4 1,114,520 - +0.4 1,114,520 - +0.4 1,114,520 - -0.6 1,114,520 - +0.4 1,114,521 - +0.4 1,114,522 + -0.6 1,114,523 + -0.8 1,114,523 + +0.2 1,114,523 + -1.6 1,114,523 + +1.4 1,114,531 - -0.7 1,114,541 - -2.0 1,114,542 + -0.6 1,114,552 - -1.2 1,114,562 - +0.4 1,114,567 - -0.6 1,114,569 + -1.6 1,114,569 + +0.4 1,114,577 - -1.6 1,114,590 + +0.4 1,114,593 - +0.4 1,114,600 + +0.4 1,114,600 + -1.7 1,114,600 + +1.4 1,114,600 + -1.0 1,114,608 - +0.4 1,114,608 - +0.4 1,114,610 + -0.4 1,114,612 + -0.4 1,114,613 - +0.4 1,114,620 + -0.6 1,114,620 - +0.4 1,114,661 + +0.4 1,114,678 + +1.9 1,114,678 + +0.4 1,114,678 + -0.6 1,114,678 + -0.6 1,114,686 - -0.6 1,114,700 + +0.4 1,114,700 + -1.6 1,114,708 - -2.0 1,114,733 + -0.6 1,114,737 - +0.4 1,114,740 + -1.6 1,114,740 + +0.4 1,114,740 + +0.4 1,114,740 + +0.4 1,114,743 + -1.4 1,114,745 + Dsui_1078 0.10 -0.6 1,114,746 - Dsui_1078 0.11 +0.4 1,114,746 - Dsui_1078 0.11 +0.4 1,114,748 + Dsui_1078 0.12 -1.1 1,114,750 + Dsui_1078 0.12 -0.6 1,114,751 - Dsui_1078 0.13 +0.4 1,114,754 - Dsui_1078 0.14 -0.6 1,114,789 - Dsui_1078 0.27 -0.6 1,114,807 + Dsui_1078 0.34 -0.9 1,114,807 + Dsui_1078 0.34 -1.6 1,114,815 - Dsui_1078 0.37 +0.4 1,114,822 - Dsui_1078 0.39 +0.4 1,114,824 + Dsui_1078 0.40 -0.6 1,114,831 + Dsui_1078 0.43 +0.4 1,114,831 + Dsui_1078 0.43 -1.4 1,114,831 + Dsui_1078 0.43 +0.4 1,114,831 + Dsui_1078 0.43 -1.2 1,114,831 + Dsui_1078 0.43 -0.1 1,114,839 - Dsui_1078 0.46 -0.6 1,114,839 - Dsui_1078 0.46 +0.4 1,114,852 + Dsui_1078 0.51 -2.1 1,114,857 + Dsui_1078 0.52 -1.6 1,114,858 - Dsui_1078 0.53 +0.4 1,114,860 - Dsui_1078 0.54 -1.2 1,114,865 - Dsui_1078 0.55 -0.6 1,114,865 - Dsui_1078 0.55 -0.6 1,114,869 + Dsui_1078 0.57 -0.6 1,114,875 + Dsui_1078 0.59 -0.6 1,114,877 - Dsui_1078 0.60 +0.4 1,114,880 + Dsui_1078 0.61 +0.4 1,114,883 + Dsui_1078 0.62 -0.6 1,114,883 + Dsui_1078 0.62 +0.4 1,114,883 - Dsui_1078 0.62 -2.0 1,114,909 + Dsui_1078 0.72 -1.6 1,114,910 - Dsui_1078 0.72 -2.0 1,114,916 - Dsui_1078 0.75 +0.4 1,114,917 - Dsui_1078 0.75 -1.2 1,114,921 + Dsui_1078 0.76 -0.2 1,114,921 + Dsui_1078 0.76 +0.4 1,114,922 + Dsui_1078 0.77 -1.6 1,114,927 + Dsui_1078 0.79 -2.9 1,114,927 + Dsui_1078 0.79 -1.2 1,114,927 + Dsui_1078 0.79 -1.2 1,114,927 + Dsui_1078 0.79 +0.4 1,114,927 + Dsui_1078 0.79 +0.4 1,114,927 + Dsui_1078 0.79 -1.2 1,114,927 + Dsui_1078 0.79 +0.4 1,114,927 + Dsui_1078 0.79 -0.6 1,114,929 + Dsui_1078 0.79 -0.6 1,114,929 - Dsui_1078 0.79 -0.6 1,114,932 - Dsui_1078 0.81 -1.2 1,114,935 - Dsui_1078 0.82 +0.4 1,114,935 - Dsui_1078 0.82 -1.2 1,114,935 - Dsui_1078 0.82 +0.4 1,114,935 - Dsui_1078 0.82 +0.4 1,114,935 - Dsui_1078 0.82 -2.2 1,114,935 - Dsui_1078 0.82 -1.2 1,114,935 - Dsui_1078 0.82 -1.2 1,114,935 - Dsui_1078 0.82 +0.4 1,114,935 - Dsui_1078 0.82 +0.4 1,114,935 - Dsui_1078 0.82 -0.6 1,114,935 - Dsui_1078 0.82 -0.6 1,114,935 - Dsui_1078 0.82 -0.6 1,114,942 + Dsui_1078 0.84 -1.2 1,114,942 - Dsui_1078 0.84 +0.4 1,114,950 - Dsui_1078 0.87 +0.4 1,114,957 + -2.2 1,114,957 + -0.6 1,114,957 + -1.2 1,114,957 + +0.4 1,114,965 + +0.4 1,114,970 + -0.6 1,114,973 - -0.6 1,114,973 - +0.4 1,114,973 - +0.4
Or see this region's nucleotide sequence