Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3121

Experiment: MoLS4 without vitamins with Casaminos 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without vitamins with Casaminos 0.05%
3,268,788	+		DVU3119	0.68	+0.9
3,268,808	+		DVU3119	0.69	-0.1
3,268,871	+		DVU3119	0.73	-0.0
3,268,914	+		DVU3119	0.76	+0.3
3,268,969	-		DVU3119	0.79	+0.8
3,268,987	-		DVU3119	0.80	-0.7
3,269,023	-		DVU3119	0.82	+0.6
3,269,028	-		DVU3119	0.82	-0.7
3,269,158	+				-0.4
3,269,158	+				-0.9
3,269,158	+				+0.1
3,269,166	-				-0.7
3,269,185	-				-0.1
3,269,189	+				+0.9
3,269,197	-				+0.3
3,269,218	-				-0.5
3,269,257	-				+0.0
3,269,313	-				+0.1
3,269,531	-				-0.1
3,269,540	+				-1.7
3,269,540	+				+0.9
3,269,550	+				-0.9
3,269,627	+				+1.5
3,269,751	+				+0.0
3,269,820	+				+1.0
3,269,851	+				-0.8
3,269,903	+		DVU3121	0.11	+0.1
3,269,906	-		DVU3121	0.12	-0.7
3,269,916	-		DVU3121	0.12	-0.5
3,270,060	+		DVU3121	0.25	+0.3
3,270,096	+		DVU3121	0.28	+1.6
3,270,096	+		DVU3121	0.28	-0.5
3,270,115	+		DVU3121	0.30	-1.1
3,270,115	+		DVU3121	0.30	-0.5
3,270,123	-		DVU3121	0.31	-0.1
3,270,123	-		DVU3121	0.31	+0.9
3,270,144	-		DVU3121	0.33	-0.7
3,270,169	+		DVU3121	0.35	-1.3
3,270,179	+		DVU3121	0.36	+0.9
3,270,182	-		DVU3121	0.36	+0.6
3,270,214	+		DVU3121	0.39	+0.2
3,270,232	+		DVU3121	0.40	-1.3
3,270,232	+		DVU3121	0.40	-0.1
3,270,235	-		DVU3121	0.41	-0.5
3,270,240	-		DVU3121	0.41	-0.1
3,270,253	+		DVU3121	0.42	+1.0
3,270,280	-		DVU3121	0.45	+0.3
3,270,294	+		DVU3121	0.46	+1.4
3,270,312	-		DVU3121	0.47	+2.0
3,270,342	-		DVU3121	0.50	+0.9
3,270,384	-		DVU3121	0.54	-0.7
3,270,389	-		DVU3121	0.54	-1.9
3,270,391	-		DVU3121	0.54	-0.3
3,270,439	+		DVU3121	0.59	-0.2
3,270,509	+		DVU3121	0.65	-1.1
3,270,509	+		DVU3121	0.65	-0.1
3,270,553	-		DVU3121	0.69	-0.7
3,270,575	-		DVU3121	0.71	+0.5
3,270,575	-		DVU3121	0.71	-0.1
3,270,597	+		DVU3121	0.73	-0.1
3,270,658	+		DVU3121	0.78	+0.4
3,270,666	-		DVU3121	0.79	+0.6
3,270,692	-		DVU3121	0.81	-0.8
3,270,705	+		DVU3121	0.82	-0.3
3,270,713	+		DVU3121	0.83	-0.6
3,270,726	+		DVU3121	0.84	-0.2
3,270,735	+		DVU3121	0.85	-0.3
3,270,805	+				-0.8
3,270,822	-				+0.9
3,270,916	+				-2.2
3,270,916	+				+1.9
3,270,923	+				+0.0
3,270,924	-				-0.5
3,270,928	+				-0.2
3,270,931	-				+0.3
3,271,214	-				-0.3
3,271,357	+		DVU3123	0.22	-0.3
3,271,389	+		DVU3123	0.27	+0.4
3,271,474	-		DVU3123	0.39	+0.7
3,271,514	+		DVU3123	0.45	+0.9
3,271,522	-		DVU3123	0.46	-1.0
3,271,551	-		DVU3123	0.50	+0.2
3,271,682	-		DVU3123	0.69	+0.9
3,271,682	-		DVU3123	0.69	-0.1
3,271,743	+		DVU3123	0.77	-0.7
3,271,767	+		DVU3123	0.81	-1.7
3,271,821	+		DVU3123	0.89	-1.7
3,271,897	-				+0.8