Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2540

Experiment: MoLS4 without vitamins with Casaminos 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without vitamins with Casaminos 0.05%
2,651,462	+		DVU2539	0.80	-0.1
2,651,479	+				+0.7
2,651,529	+				-0.5
2,651,551	+				-0.1
2,651,559	-				+0.1
2,651,595	-				-0.4
2,651,611	+		DVU2540	0.10	+0.8
2,651,617	-		DVU2540	0.11	-0.0
2,651,634	-		DVU2540	0.12	-0.3
2,651,634	-		DVU2540	0.12	+1.0
2,651,720	-		DVU2540	0.20	+0.1
2,651,732	-		DVU2540	0.21	+2.0
2,651,742	+		DVU2540	0.22	-0.0
2,651,778	+		DVU2540	0.25	+1.5
2,651,811	-		DVU2540	0.28	+0.3
2,651,829	-		DVU2540	0.29	-0.0
2,651,843	+		DVU2540	0.31	-0.0
2,651,870	-		DVU2540	0.33	+0.6
2,651,920	-		DVU2540	0.37	-0.1
2,651,946	-		DVU2540	0.40	-0.0
2,651,948	-		DVU2540	0.40	-0.0
2,651,957	+		DVU2540	0.41	+2.0
2,652,009	-		DVU2540	0.45	+0.2
2,652,091	-		DVU2540	0.52	-0.1
2,652,139	-		DVU2540	0.57	-0.6
2,652,165	-		DVU2540	0.59	-0.4
2,652,186	-		DVU2540	0.61	+1.0
2,652,202	+		DVU2540	0.62	+0.0
2,652,225	+		DVU2540	0.64	-1.4
2,652,225	+		DVU2540	0.64	+0.3
2,652,241	+		DVU2540	0.66	-0.4
2,652,283	-		DVU2540	0.69	+0.8
2,652,487	+		DVU2540	0.87	+2.0
2,652,519	+		DVU2540	0.90	+0.5
2,652,546	+				-0.0
2,652,704	-				+0.1
2,652,745	+		DVU2541	0.13	+0.0
2,652,745	+		DVU2541	0.13	-0.5
2,652,847	+		DVU2541	0.25	-0.6
2,652,869	+		DVU2541	0.28	+1.0
2,652,900	-		DVU2541	0.32	-3.0
2,652,928	+		DVU2541	0.35	-1.0
2,652,936	-		DVU2541	0.36	-0.6
2,652,964	+		DVU2541	0.40	-0.0
2,652,977	+		DVU2541	0.41	-0.0
2,653,000	-		DVU2541	0.44	-0.5
2,653,010	+		DVU2541	0.45	-0.4
2,653,035	+		DVU2541	0.49	+1.2
2,653,043	+		DVU2541	0.50	-0.0
2,653,092	+		DVU2541	0.56	+1.0
2,653,102	+		DVU2541	0.57	+0.7
2,653,102	+		DVU2541	0.57	-0.3
2,653,102	+		DVU2541	0.57	-0.4
2,653,107	+		DVU2541	0.57	-0.4
2,653,126	+		DVU2541	0.60	-0.0
2,653,134	+		DVU2541	0.61	-0.5
2,653,203	+		DVU2541	0.69	-0.5
2,653,270	+		DVU2541	0.78	-0.1
2,653,320	-		DVU2541	0.84	-0.4
2,653,376	+				+0.1
2,653,377	-				+0.1
2,653,384	-				+1.0
2,653,388	+				+0.3
2,653,453	+				-0.1
2,653,470	+				+0.0
2,653,478	-				+1.4
2,653,478	-				-0.8
2,653,559	+				-0.5
2,653,559	+				+2.0
2,653,567	-				-0.4