Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2241

Experiment: MoLS4 without vitamins with Casaminos 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without vitamins with Casaminos 0.05%
2,333,104	+		DVU2240	0.44	-0.2
2,333,182	+		DVU2240	0.48	-0.5
2,333,298	-		DVU2240	0.55	+0.1
2,333,308	-		DVU2240	0.56	-0.2
2,333,361	+		DVU2240	0.59	-0.3
2,333,385	+		DVU2240	0.61	-0.6
2,333,598	+		DVU2240	0.74	-0.2
2,333,626	-		DVU2240	0.75	+0.6
2,333,730	+		DVU2240	0.82	+0.3
2,333,806	+		DVU2240	0.86	+0.0
2,333,814	-		DVU2240	0.87	+0.7
2,333,842	+		DVU2240	0.88	-0.3
2,333,845	+		DVU2240	0.89	+0.3
2,333,864	-		DVU2240	0.90	+1.0
2,333,920	-				+0.4
2,333,971	+				-0.6
2,334,007	-				-0.3
2,334,016	+				-0.8
2,334,061	+				-0.9
2,334,061	+				-1.2
2,334,131	-				-0.0
2,334,223	-	pdxA	DVU2241	0.15	-3.0
2,334,223	-	pdxA	DVU2241	0.15	-2.8
2,334,237	-	pdxA	DVU2241	0.16	-3.1
2,334,274	+	pdxA	DVU2241	0.19	-1.7
2,334,349	+	pdxA	DVU2241	0.26	-1.0
2,334,362	-	pdxA	DVU2241	0.27	-2.2
2,334,364	-	pdxA	DVU2241	0.27	-1.0
2,334,409	-	pdxA	DVU2241	0.31	-2.6
2,334,411	+	pdxA	DVU2241	0.31	-2.2
2,334,453	+	pdxA	DVU2241	0.34	-0.0
2,334,472	-	pdxA	DVU2241	0.36	-2.5
2,334,539	+	pdxA	DVU2241	0.41	-2.4
2,334,566	+	pdxA	DVU2241	0.43	-0.4
2,334,574	-	pdxA	DVU2241	0.44	+1.0
2,334,576	+	pdxA	DVU2241	0.44	-3.1
2,334,658	+	pdxA	DVU2241	0.51	-2.2
2,334,658	+	pdxA	DVU2241	0.51	-1.3
2,334,666	-	pdxA	DVU2241	0.52	-2.8
2,334,666	-	pdxA	DVU2241	0.52	-1.9
2,334,708	-	pdxA	DVU2241	0.55	-3.0
2,334,719	-	pdxA	DVU2241	0.56	-2.2
2,334,779	+	pdxA	DVU2241	0.61	-0.9
2,334,787	-	pdxA	DVU2241	0.62	-2.2
2,334,787	-	pdxA	DVU2241	0.62	-2.7
2,334,797	-	pdxA	DVU2241	0.62	-2.2
2,334,985	+	pdxA	DVU2241	0.78	-1.5
2,334,993	-	pdxA	DVU2241	0.78	-2.2
2,335,037	+	pdxA	DVU2241	0.82	-1.0
2,335,159	-				-1.8
2,335,200	-				-1.9
2,335,223	-				-1.7
2,335,287	+				-0.3
2,335,313	-				+0.2
2,335,337	-				-0.1
2,335,484	+				+0.7
2,335,617	-				-0.4
2,335,733	+		DVU2242	0.22	-0.2
2,335,760	+		DVU2242	0.25	+1.0
2,335,761	-		DVU2242	0.25	+1.0
2,335,827	-		DVU2242	0.32	-1.9
2,335,832	-		DVU2242	0.32	-0.2
2,335,839	-		DVU2242	0.33	-0.4
2,336,002	+		DVU2242	0.50	-0.4
2,336,004	+		DVU2242	0.50	-0.0
2,336,004	+		DVU2242	0.50	-0.0
2,336,031	+		DVU2242	0.53	-0.0
2,336,089	-		DVU2242	0.59	-1.0
2,336,089	-		DVU2242	0.59	+1.4
2,336,176	-		DVU2242	0.68	+0.1
2,336,211	+		DVU2242	0.72	+2.0
2,336,234	-		DVU2242	0.75	-0.7