Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1638
Experiment: MoLS4 without vitamins with Casaminos 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 without vitamins with Casaminos 0.05% |
---|---|---|---|---|---|
remove | |||||
1,718,591 | + | +0.1 | |||
1,718,666 | + | +2.0 | |||
1,718,842 | + | +0.7 | |||
1,718,850 | - | -0.1 | |||
1,719,031 | + | -0.2 | |||
1,719,058 | - | -0.6 | |||
1,719,831 | - | +0.1 | |||
1,720,050 | - | -0.2 | |||
1,720,073 | + | DVU1639 | 0.12 | +2.0 | |
1,720,123 | - | DVU1639 | 0.17 | +0.3 | |
1,720,129 | - | DVU1639 | 0.18 | +0.4 | |
1,720,181 | + | DVU1639 | 0.23 | +0.4 | |
1,720,245 | - | DVU1639 | 0.30 | +0.0 | |
1,720,253 | - | DVU1639 | 0.30 | -0.1 | |
1,720,303 | + | DVU1639 | 0.35 | -0.3 | |
1,720,311 | - | DVU1639 | 0.36 | +0.7 | |
1,720,334 | - | DVU1639 | 0.38 | +0.4 | |
1,720,596 | + | DVU1639 | 0.65 | +0.6 | |
1,720,599 | - | DVU1639 | 0.65 | +0.4 | |
1,720,604 | - | DVU1639 | 0.66 | -0.4 | |
1,720,757 | - | DVU1639 | 0.81 | -0.2 | |
1,720,757 | - | DVU1639 | 0.81 | -0.2 |
Or see this region's nucleotide sequence