Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1004

Experiment: MoLS4 without vitamins with Casaminos 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without vitamins with Casaminos 0.05%
1,098,548	-		DVU1003	0.25	-0.2
1,098,570	-		DVU1003	0.27	-1.7
1,098,612	-		DVU1003	0.32	-0.6
1,098,675	+		DVU1003	0.38	+1.0
1,098,683	-		DVU1003	0.39	+0.2
1,098,742	+		DVU1003	0.45	-1.7
1,098,766	-		DVU1003	0.47	-0.6
1,098,843	+		DVU1003	0.55	+0.0
1,098,904	-		DVU1003	0.61	+0.6
1,099,040	+		DVU1003	0.75	-1.0
1,099,136	+		DVU1003	0.85	-0.1
1,099,164	-		DVU1003	0.88	-0.4
1,099,164	-		DVU1003	0.88	-0.0
1,099,279	+				-0.4
1,099,286	+				+1.0
1,099,288	-				+2.4
1,099,349	+				-0.3
1,099,393	+				-0.6
1,099,393	+				-0.6
1,099,401	-				+0.6
1,099,406	+				-0.5
1,099,409	-				-1.6
1,099,415	+				-0.3
1,099,464	+				+1.5
1,099,475	+				+1.1
1,099,483	-				+0.0
1,099,504	+				+0.4
1,099,513	-				+0.7
1,099,515	+				+0.2
1,099,551	+		DVU1004	0.14	+0.3
1,099,592	-		DVU1004	0.19	+0.0
1,099,675	+		DVU1004	0.28	+1.4
1,099,675	+		DVU1004	0.28	-0.2
1,099,776	+		DVU1004	0.39	+0.6
1,099,822	+		DVU1004	0.45	+0.2
1,099,910	+		DVU1004	0.55	+0.4
1,100,016	+		DVU1004	0.67	-0.5
1,100,024	-		DVU1004	0.67	+1.2
1,100,024	-		DVU1004	0.67	+0.6
1,100,038	+		DVU1004	0.69	+1.6
1,100,059	-		DVU1004	0.71	+0.1
1,100,061	+		DVU1004	0.72	+0.4
1,100,076	-		DVU1004	0.73	+0.7
1,100,172	+		DVU1004	0.84	-0.1
1,100,180	-		DVU1004	0.85	+1.0
1,100,213	+		DVU1004	0.89	+0.4
1,100,213	+		DVU1004	0.89	+1.7
1,100,222	+		DVU1004	0.90	-0.3
1,100,268	+				+2.0
1,100,337	-				-0.0
1,100,396	+				-0.3
1,100,406	-				-0.2
1,100,452	+				-1.1
1,100,452	+				-0.5
1,100,492	-				-1.0
1,100,572	+				-0.0
1,100,609	+				-1.3
1,100,616	-				-0.5
1,100,668	-		DVU1005	0.10	+0.2
1,100,732	-		DVU1005	0.16	-0.9
1,100,858	-		DVU1005	0.26	-0.2
1,100,860	+		DVU1005	0.26	-0.0
1,100,880	+		DVU1005	0.28	-0.5
1,100,960	+		DVU1005	0.34	-0.6
1,100,981	+		DVU1005	0.36	-0.4
1,101,026	+		DVU1005	0.40	-0.3
1,101,049	+		DVU1005	0.42	+1.3
1,101,073	+		DVU1005	0.43	+0.6
1,101,073	+		DVU1005	0.43	-0.8
1,101,081	-		DVU1005	0.44	-0.6
1,101,103	+		DVU1005	0.46	+0.4
1,101,145	-		DVU1005	0.49	-0.7
1,101,163	-		DVU1005	0.51	-1.0
1,101,205	-		DVU1005	0.54	+0.7
1,101,264	-		DVU1005	0.59	-0.9