Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33470

Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.004 mg/ml
3,505,995	+		PGA1_c33450	0.88	+0.3
3,506,018	+				-0.6
3,506,054	+				-0.9
3,506,081	-				+1.1
3,506,140	+				+0.6
3,506,140	+				-0.8
3,506,161	-		PGA1_c33460	0.13	+1.7
3,506,191	+		PGA1_c33460	0.17	+0.4
3,506,199	+		PGA1_c33460	0.18	+0.4
3,506,199	-		PGA1_c33460	0.18	+1.2
3,506,328	-		PGA1_c33460	0.35	+0.4
3,506,390	-		PGA1_c33460	0.43	+0.2
3,506,403	-		PGA1_c33460	0.45	-1.5
3,506,421	-		PGA1_c33460	0.47	+1.9
3,506,433	+		PGA1_c33460	0.49	-0.5
3,506,442	-		PGA1_c33460	0.50	-0.2
3,506,497	+		PGA1_c33460	0.57	-1.0
3,506,497	+		PGA1_c33460	0.57	+0.7
3,506,505	-		PGA1_c33460	0.59	+1.7
3,506,505	-		PGA1_c33460	0.59	-0.7
3,506,505	-		PGA1_c33460	0.59	+0.5
3,506,505	-		PGA1_c33460	0.59	-2.3
3,506,505	-		PGA1_c33460	0.59	+0.6
3,506,505	-		PGA1_c33460	0.59	-1.2
3,506,505	-		PGA1_c33460	0.59	-1.9
3,506,505	-		PGA1_c33460	0.59	+0.7
3,506,505	-		PGA1_c33460	0.59	+0.6
3,506,505	-		PGA1_c33460	0.59	-0.9
3,506,523	+		PGA1_c33460	0.61	+0.2
3,506,524	+		PGA1_c33460	0.61	+1.8
3,506,546	+		PGA1_c33460	0.64	+1.9
3,506,559	+		PGA1_c33460	0.66	+1.7
3,506,564	+		PGA1_c33460	0.66	+0.6
3,506,572	+		PGA1_c33460	0.67	-0.3
3,506,580	+		PGA1_c33460	0.69	-2.1
3,506,588	-		PGA1_c33460	0.70	+0.7
3,506,630	+		PGA1_c33460	0.75	+0.6
3,506,725	-		PGA1_c33460	0.88	-1.6
3,506,773	+				+0.7
3,506,817	+				+1.3
3,506,825	-				-0.1
3,506,825	-				+1.0
3,506,837	+				+0.5
3,506,845	-				+0.0
3,506,845	-				-0.6
3,506,845	-				+0.1
3,506,847	+				+1.1
3,506,855	-				+0.1
3,506,855	-				-0.9
3,506,857	+				+0.4
3,506,865	-				+0.1
3,506,865	-				-1.7
3,506,865	-				+0.1
3,506,879	-				+0.1
3,506,879	-				-1.0
3,506,886	+				-0.1
3,506,886	+				-0.7
3,506,947	-				-3.6
3,506,976	+				-1.1
3,506,995	-				-1.2
3,507,019	-				-1.2
3,507,019	-				+0.7
3,507,019	-				-1.1
3,507,037	+				-3.0
3,507,074	+				-0.4
3,507,081	-				-0.8
3,507,083	-				-2.4
3,507,113	+		PGA1_c33470	0.11	-1.4
3,507,113	+		PGA1_c33470	0.11	-1.4
3,507,113	+		PGA1_c33470	0.11	-0.3
3,507,121	-		PGA1_c33470	0.11	+0.1
3,507,141	-		PGA1_c33470	0.13	-1.0
3,507,141	-		PGA1_c33470	0.13	+0.6
3,507,174	+		PGA1_c33470	0.15	+0.2
3,507,174	+		PGA1_c33470	0.15	-2.4
3,507,182	-		PGA1_c33470	0.15	-1.6
3,507,182	-		PGA1_c33470	0.15	-1.3
3,507,182	-		PGA1_c33470	0.15	-1.9
3,507,182	-		PGA1_c33470	0.15	-0.7
3,507,182	-		PGA1_c33470	0.15	-0.3
3,507,182	-		PGA1_c33470	0.15	+0.5
3,507,190	+		PGA1_c33470	0.16	-0.3
3,507,225	+		PGA1_c33470	0.18	-0.7
3,507,229	-		PGA1_c33470	0.18	-1.4
3,507,280	-		PGA1_c33470	0.22	-0.3
3,507,436	-		PGA1_c33470	0.32	-1.3
3,507,501	+		PGA1_c33470	0.36	+0.1
3,507,501	+		PGA1_c33470	0.36	-1.1
3,507,501	+		PGA1_c33470	0.36	-1.9
3,507,501	+		PGA1_c33470	0.36	-0.5
3,507,501	+		PGA1_c33470	0.36	-1.5
3,507,501	+		PGA1_c33470	0.36	+0.2
3,507,501	+		PGA1_c33470	0.36	-2.1
3,507,509	-		PGA1_c33470	0.37	-1.0
3,507,509	-		PGA1_c33470	0.37	-0.4
3,507,509	-		PGA1_c33470	0.37	-1.1
3,507,509	-		PGA1_c33470	0.37	-0.3
3,507,509	-		PGA1_c33470	0.37	-0.3
3,507,509	-		PGA1_c33470	0.37	-0.3
3,507,509	-		PGA1_c33470	0.37	-0.5
3,507,511	+		PGA1_c33470	0.37	-1.4
3,507,519	-		PGA1_c33470	0.37	-1.9
3,507,525	-		PGA1_c33470	0.38	-0.5
3,507,548	+		PGA1_c33470	0.39	+0.4
3,507,565	-		PGA1_c33470	0.40	-0.7
3,507,571	-		PGA1_c33470	0.41	-0.8
3,507,578	+		PGA1_c33470	0.41	+0.5
3,507,578	+		PGA1_c33470	0.41	-1.1
3,507,580	+		PGA1_c33470	0.41	-1.8
3,507,586	-		PGA1_c33470	0.42	-2.9
3,507,586	-		PGA1_c33470	0.42	-2.6
3,507,626	+		PGA1_c33470	0.44	-0.6
3,507,728	+		PGA1_c33470	0.51	-0.8
3,507,760	-		PGA1_c33470	0.53	-1.5
3,507,760	-		PGA1_c33470	0.53	-0.6
3,507,765	+		PGA1_c33470	0.54	-0.4
3,507,765	+		PGA1_c33470	0.54	+3.9
3,507,765	+		PGA1_c33470	0.54	-3.1
3,507,813	+		PGA1_c33470	0.57	-0.0
3,507,863	-		PGA1_c33470	0.60	-0.5
3,507,863	-		PGA1_c33470	0.60	-1.9
3,507,883	+		PGA1_c33470	0.61	-0.5
3,507,891	-		PGA1_c33470	0.62	-0.1
3,507,900	+		PGA1_c33470	0.62	-0.2
3,507,910	+		PGA1_c33470	0.63	-1.3
3,507,910	+		PGA1_c33470	0.63	-1.3
3,507,918	-		PGA1_c33470	0.64	-0.2
3,507,918	-		PGA1_c33470	0.64	-1.9
3,507,918	-		PGA1_c33470	0.64	-0.3
3,507,918	-		PGA1_c33470	0.64	+1.4
3,507,938	+		PGA1_c33470	0.65	-0.4
3,507,946	-		PGA1_c33470	0.65	-0.1
3,507,946	-		PGA1_c33470	0.65	-1.7
3,507,991	+		PGA1_c33470	0.68	+1.5
3,508,065	+		PGA1_c33470	0.73	-2.6
3,508,129	+		PGA1_c33470	0.77	-0.4
3,508,193	-		PGA1_c33470	0.82	+0.4
3,508,247	-		PGA1_c33470	0.85	+0.7
3,508,268	-		PGA1_c33470	0.87	-0.3
3,508,274	+		PGA1_c33470	0.87	+0.2
3,508,279	+		PGA1_c33470	0.87	-0.0
3,508,301	-		PGA1_c33470	0.89	-2.4
3,508,403	+				-1.3
3,508,416	+				-0.3
3,508,441	+				-2.1
3,508,449	-				+0.3
3,508,485	-				-1.9
3,508,528	-				+0.3
3,508,591	+				+1.7
3,509,316	+		PGA1_c33480	0.54	+0.9