Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19040

Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.004 mg/ml
1,974,071	+		PGA1_c19030	0.24	-2.4
1,974,097	+		PGA1_c19030	0.26	-2.2
1,974,102	-		PGA1_c19030	0.26	-1.4
1,974,115	-		PGA1_c19030	0.27	-0.2
1,974,127	-		PGA1_c19030	0.28	+2.6
1,974,134	+		PGA1_c19030	0.29	-1.3
1,974,134	+		PGA1_c19030	0.29	-0.4
1,974,134	+		PGA1_c19030	0.29	-2.7
1,974,134	+		PGA1_c19030	0.29	-2.9
1,974,134	+		PGA1_c19030	0.29	-1.4
1,974,142	-		PGA1_c19030	0.29	-1.8
1,974,142	-		PGA1_c19030	0.29	-0.4
1,974,181	+		PGA1_c19030	0.32	-0.6
1,974,197	+		PGA1_c19030	0.34	-1.0
1,974,272	+		PGA1_c19030	0.39	-2.4
1,974,272	+		PGA1_c19030	0.39	-1.8
1,974,280	-		PGA1_c19030	0.40	-2.0
1,974,355	-		PGA1_c19030	0.46	-2.4
1,974,378	-		PGA1_c19030	0.48	-1.4
1,974,404	-		PGA1_c19030	0.50	-0.9
1,974,546	-		PGA1_c19030	0.61	-3.7
1,974,660	-		PGA1_c19030	0.69	-3.6
1,974,678	+		PGA1_c19030	0.71	-2.3
1,974,709	+		PGA1_c19030	0.73	-2.1
1,974,714	+		PGA1_c19030	0.74	-1.8
1,974,851	-		PGA1_c19030	0.84	-0.4
1,974,899	-		PGA1_c19030	0.88	-1.8
1,975,016	+				-0.8
1,975,024	-				-3.0
1,975,026	-				-0.9
1,975,033	+				-0.0
1,975,041	-				-1.9
1,975,062	-				-3.4
1,975,121	-				-1.0
1,975,197	-				-2.0
1,975,226	-				-2.5
1,975,243	+				-2.4
1,975,251	-				-1.6
1,975,251	-				-3.1
1,975,359	-				-2.3
1,975,419	-				-1.0
1,975,483	+		PGA1_c19040	0.11	-1.7
1,975,483	+		PGA1_c19040	0.11	-2.7
1,975,491	-		PGA1_c19040	0.12	-0.8
1,975,496	-		PGA1_c19040	0.12	-0.7
1,975,511	-		PGA1_c19040	0.12	-2.6
1,975,534	-		PGA1_c19040	0.13	-1.1
1,975,609	+		PGA1_c19040	0.15	-1.2
1,975,639	+		PGA1_c19040	0.15	-1.0
1,975,640	-		PGA1_c19040	0.15	-2.2
1,975,655	-		PGA1_c19040	0.16	-1.9
1,975,662	+		PGA1_c19040	0.16	-0.1
1,975,667	+		PGA1_c19040	0.16	-0.4
1,975,670	-		PGA1_c19040	0.16	-1.0
1,975,675	-		PGA1_c19040	0.16	-4.2
1,975,703	+		PGA1_c19040	0.17	-0.4
1,975,739	+		PGA1_c19040	0.18	-3.0
1,975,746	+		PGA1_c19040	0.18	-2.2
1,975,754	-		PGA1_c19040	0.18	-1.9
1,975,754	-		PGA1_c19040	0.18	-2.2
1,975,754	-		PGA1_c19040	0.18	-3.3
1,975,835	-		PGA1_c19040	0.21	-1.4
1,975,884	+		PGA1_c19040	0.22	-0.8
1,975,940	-		PGA1_c19040	0.23	-2.1
1,975,940	-		PGA1_c19040	0.23	-2.2
1,976,077	-		PGA1_c19040	0.27	-2.6
1,976,089	+		PGA1_c19040	0.27	-2.0
1,976,129	+		PGA1_c19040	0.28	-1.3
1,976,137	-		PGA1_c19040	0.29	-0.3
1,976,172	+		PGA1_c19040	0.29	-1.0
1,976,172	+		PGA1_c19040	0.29	-2.8
1,976,216	+		PGA1_c19040	0.31	-2.5
1,976,251	+		PGA1_c19040	0.31	-1.8
1,976,310	-		PGA1_c19040	0.33	-1.0
1,976,323	-		PGA1_c19040	0.33	-1.3
1,976,412	-		PGA1_c19040	0.36	-0.6
1,976,417	-		PGA1_c19040	0.36	-1.7
1,976,491	+		PGA1_c19040	0.38	-1.0
1,976,636	+		PGA1_c19040	0.42	-1.6
1,976,680	-		PGA1_c19040	0.43	-2.1
1,976,807	+		PGA1_c19040	0.46	-2.0
1,976,863	+		PGA1_c19040	0.48	-0.9
1,976,896	+		PGA1_c19040	0.48	-1.5
1,976,933	-		PGA1_c19040	0.49	-0.6
1,976,954	+		PGA1_c19040	0.50	+0.2
1,976,962	-		PGA1_c19040	0.50	-1.5
1,977,034	+		PGA1_c19040	0.52	-2.4
1,977,042	-		PGA1_c19040	0.52	-2.4
1,977,080	+		PGA1_c19040	0.53	-1.8
1,977,080	+		PGA1_c19040	0.53	-0.2
1,977,124	+		PGA1_c19040	0.54	-1.4
1,977,174	+		PGA1_c19040	0.56	-1.8
1,977,174	+		PGA1_c19040	0.56	-2.1
1,977,262	+		PGA1_c19040	0.58	-0.3
1,977,270	-		PGA1_c19040	0.58	-0.9
1,977,270	-		PGA1_c19040	0.58	-1.0
1,977,307	-		PGA1_c19040	0.59	-1.8
1,977,324	+		PGA1_c19040	0.60	-2.2
1,977,355	+		PGA1_c19040	0.60	+0.4
1,977,395	-		PGA1_c19040	0.62	-1.4
1,977,431	-		PGA1_c19040	0.62	-3.0
1,977,431	-		PGA1_c19040	0.62	-2.0
1,977,437	-		PGA1_c19040	0.63	-0.7
1,977,739	+		PGA1_c19040	0.71	-3.0
1,977,747	-		PGA1_c19040	0.71	-2.2
1,977,747	-		PGA1_c19040	0.71	-1.8
1,977,798	+		PGA1_c19040	0.72	-2.6
1,977,888	+		PGA1_c19040	0.74	-0.5
1,977,898	+		PGA1_c19040	0.75	-1.4
1,978,177	+		PGA1_c19040	0.82	-2.0
1,978,185	-		PGA1_c19040	0.82	-2.2
1,978,185	-		PGA1_c19040	0.82	-2.2
1,978,233	-		PGA1_c19040	0.84	-2.2
1,978,317	-		PGA1_c19040	0.86	-3.5
1,978,380	+		PGA1_c19040	0.87	+0.9
1,978,526	-				-1.0
1,978,597	+				-1.9
1,978,649	-				-2.1
1,978,782	-				+0.2
1,978,934	-				+2.1
1,978,934	-				+0.3
1,978,939	+				-3.1
1,979,017	-		PGA1_c19050	0.30	+0.0
1,979,054	+		PGA1_c19050	0.46	-1.8
1,979,069	+		PGA1_c19050	0.53	+0.2
1,979,069	+		PGA1_c19050	0.53	-1.2
1,979,078	+		PGA1_c19050	0.57	-0.2
1,979,186	+				+0.1
1,979,192	-				-0.4
1,979,192	-				+0.3
1,979,236	-				-1.9
1,979,295	+				-2.0
1,979,349	-				-0.5
1,979,383	+				+0.4
1,979,398	+				-1.8
1,979,406	-		PGA1_c19060	0.10	-0.8
1,979,406	-		PGA1_c19060	0.10	+0.4
1,979,511	-		PGA1_c19060	0.16	+0.9
1,979,534	+		PGA1_c19060	0.17	+1.0
1,979,578	-		PGA1_c19060	0.20	+1.0
1,979,651	+		PGA1_c19060	0.24	-1.5
1,979,651	+		PGA1_c19060	0.24	+0.3
1,979,659	-		PGA1_c19060	0.24	+1.1
1,979,659	-		PGA1_c19060	0.24	-0.7
1,979,710	+		PGA1_c19060	0.27	-2.0
1,979,853	+		PGA1_c19060	0.35	-0.2