Experiment: ALP with perchlorate 12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2764 and Dsui_2765 are separated by 4 nucleotides Dsui_2765 and Dsui_2766 are separated by 79 nucleotides Dsui_2766 and Dsui_2767 are separated by 67 nucleotides Dsui_2767 and Dsui_2768 are separated by 109 nucleotides
Dsui_2764: Dsui_2764 - hypothetical protein, at 2,923,217 to 2,923,468
_2764
Dsui_2765: Dsui_2765 - putative membrane protein, at 2,923,473 to 2,924,222
_2765
Dsui_2766: Dsui_2766 - putative homoserine kinase type II (protein kinase fold), at 2,924,302 to 2,925,309
_2766
Dsui_2767: Dsui_2767 - glutaredoxin-like protein, at 2,925,377 to 2,925,763
_2767
Dsui_2768: Dsui_2768 - uncharacterized protein involved in outer membrane biogenesis, at 2,925,873 to 2,926,982
_2768
Position (kb)
2924
2925
2926 Strain fitness (log2 ratio)
-2
-1
0
1 at 2923.370 kb on - strand, within Dsui_2764 at 2923.493 kb on + strand at 2923.501 kb on - strand at 2923.510 kb on + strand at 2923.511 kb on - strand at 2923.555 kb on + strand, within Dsui_2765 at 2923.597 kb on + strand, within Dsui_2765 at 2923.696 kb on - strand, within Dsui_2765 at 2923.788 kb on - strand, within Dsui_2765 at 2923.799 kb on - strand, within Dsui_2765 at 2923.822 kb on + strand, within Dsui_2765 at 2923.887 kb on + strand, within Dsui_2765 at 2924.057 kb on + strand, within Dsui_2765 at 2924.139 kb on - strand, within Dsui_2765 at 2924.139 kb on - strand, within Dsui_2765 at 2924.159 kb on + strand at 2924.209 kb on - strand at 2924.270 kb on + strand at 2924.326 kb on + strand at 2924.484 kb on + strand, within Dsui_2766 at 2924.610 kb on - strand at 2924.784 kb on + strand, within Dsui_2766 at 2924.868 kb on - strand at 2924.944 kb on + strand, within Dsui_2766 at 2925.008 kb on + strand, within Dsui_2766 at 2925.107 kb on + strand, within Dsui_2766 at 2925.210 kb on + strand at 2925.233 kb on + strand at 2925.290 kb on + strand at 2925.290 kb on + strand at 2925.290 kb on + strand at 2925.305 kb on + strand at 2925.313 kb on - strand at 2925.362 kb on + strand at 2925.370 kb on - strand at 2925.475 kb on + strand at 2925.503 kb on + strand, within Dsui_2767 at 2925.565 kb on + strand, within Dsui_2767 at 2925.565 kb on + strand, within Dsui_2767 at 2925.575 kb on + strand, within Dsui_2767 at 2925.575 kb on + strand, within Dsui_2767 at 2925.583 kb on - strand at 2925.916 kb on + strand at 2925.918 kb on - strand at 2925.990 kb on + strand, within Dsui_2768 at 2926.030 kb on + strand, within Dsui_2768 at 2926.097 kb on + strand, within Dsui_2768 at 2926.271 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 12 mM remove 2,923,370 - Dsui_2764 0.61 +0.5 2,923,493 + +0.5 2,923,501 - -2.5 2,923,510 + -0.1 2,923,511 - +0.5 2,923,555 + Dsui_2765 0.11 -0.5 2,923,597 + Dsui_2765 0.17 -0.5 2,923,696 - Dsui_2765 0.30 +0.5 2,923,788 - Dsui_2765 0.42 -1.5 2,923,799 - Dsui_2765 0.43 +0.5 2,923,822 + Dsui_2765 0.47 -1.0 2,923,887 + Dsui_2765 0.55 +0.5 2,924,057 + Dsui_2765 0.78 -0.5 2,924,139 - Dsui_2765 0.89 -0.5 2,924,139 - Dsui_2765 0.89 +0.5 2,924,159 + +0.5 2,924,209 - -1.8 2,924,270 + -0.5 2,924,326 + -1.0 2,924,484 + Dsui_2766 0.18 -2.0 2,924,610 - +0.6 2,924,784 + Dsui_2766 0.48 +0.6 2,924,868 - -0.4 2,924,944 + Dsui_2766 0.64 +0.6 2,925,008 + Dsui_2766 0.70 -1.0 2,925,107 + Dsui_2766 0.80 -1.4 2,925,210 + +0.6 2,925,233 + -0.4 2,925,290 + -0.4 2,925,290 + +0.6 2,925,290 + -0.4 2,925,305 + -0.1 2,925,313 - -1.8 2,925,362 + -2.4 2,925,370 - +0.6 2,925,475 + -0.4 2,925,503 + Dsui_2767 0.33 -0.4 2,925,565 + Dsui_2767 0.49 -1.0 2,925,565 + Dsui_2767 0.49 -1.0 2,925,575 + Dsui_2767 0.51 +0.6 2,925,575 + Dsui_2767 0.51 -1.0 2,925,583 - +0.6 2,925,916 + +0.6 2,925,918 - -1.0 2,925,990 + Dsui_2768 0.11 +0.6 2,926,030 + Dsui_2768 0.14 -1.5 2,926,097 + Dsui_2768 0.20 -1.5 2,926,271 - +0.5
Or see this region's nucleotide sequence