Experiment: ALP with perchlorate 12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2287 and Dsui_2288 are separated by 112 nucleotides Dsui_2288 and Dsui_2289 are separated by 14 nucleotides
Dsui_2287: Dsui_2287 - aminopeptidase N, at 2,439,993 to 2,442,602
_2287
Dsui_2288: Dsui_2288 - hypothetical protein, at 2,442,715 to 2,443,389
_2288
Dsui_2289: Dsui_2289 - qaraquat-inducible protein B, at 2,443,404 to 2,444,975
_2289
Position (kb)
2442
2443
2444 Strain fitness (log2 ratio)
-2
-1
0
1 at 2441.830 kb on + strand, within Dsui_2287 at 2441.830 kb on + strand, within Dsui_2287 at 2441.883 kb on - strand at 2441.927 kb on + strand at 2441.930 kb on - strand at 2442.001 kb on - strand at 2442.087 kb on - strand at 2442.141 kb on + strand, within Dsui_2287 at 2442.191 kb on - strand at 2442.201 kb on - strand at 2442.274 kb on - strand at 2442.422 kb on + strand at 2442.422 kb on + strand at 2442.422 kb on + strand at 2442.453 kb on - strand at 2442.468 kb on + strand at 2442.513 kb on + strand at 2442.521 kb on - strand at 2442.528 kb on + strand at 2442.558 kb on - strand at 2442.911 kb on + strand at 2442.978 kb on + strand, within Dsui_2288 at 2443.131 kb on + strand at 2443.179 kb on + strand, within Dsui_2288 at 2443.408 kb on - strand at 2443.568 kb on - strand, within Dsui_2289 at 2443.596 kb on - strand, within Dsui_2289 at 2443.646 kb on + strand at 2443.782 kb on + strand, within Dsui_2289 at 2443.804 kb on + strand at 2443.805 kb on - strand, within Dsui_2289 at 2443.870 kb on + strand, within Dsui_2289 at 2443.918 kb on + strand, within Dsui_2289 at 2444.007 kb on - strand, within Dsui_2289 at 2444.055 kb on - strand, within Dsui_2289 at 2444.059 kb on - strand at 2444.122 kb on + strand, within Dsui_2289 at 2444.122 kb on + strand at 2444.233 kb on - strand, within Dsui_2289 at 2444.233 kb on - strand, within Dsui_2289 at 2444.233 kb on - strand, within Dsui_2289 at 2444.255 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 12 mM remove 2,441,830 + Dsui_2287 0.70 +0.2 2,441,830 + Dsui_2287 0.70 -0.7 2,441,883 - -0.4 2,441,927 + +0.6 2,441,930 - +0.6 2,442,001 - -0.4 2,442,087 - +0.6 2,442,141 + Dsui_2287 0.82 -0.2 2,442,191 - +0.6 2,442,201 - -1.0 2,442,274 - +0.6 2,442,422 + -0.4 2,442,422 + +0.6 2,442,422 + -2.2 2,442,453 - -1.4 2,442,468 + -0.0 2,442,513 + +0.3 2,442,521 - +0.6 2,442,528 + +1.6 2,442,558 - -1.0 2,442,911 + +0.6 2,442,978 + Dsui_2288 0.39 +0.6 2,443,131 + +0.6 2,443,179 + Dsui_2288 0.69 -1.8 2,443,408 - -0.4 2,443,568 - Dsui_2289 0.10 -1.8 2,443,596 - Dsui_2289 0.12 +0.6 2,443,646 + -0.4 2,443,782 + Dsui_2289 0.24 -1.8 2,443,804 + +0.6 2,443,805 - Dsui_2289 0.26 -0.4 2,443,870 + Dsui_2289 0.30 -1.0 2,443,918 + Dsui_2289 0.33 -2.0 2,444,007 - Dsui_2289 0.38 +0.6 2,444,055 - Dsui_2289 0.41 -1.4 2,444,059 - -0.4 2,444,122 + Dsui_2289 0.46 -0.4 2,444,122 + -0.4 2,444,233 - Dsui_2289 0.53 +0.6 2,444,233 - Dsui_2289 0.53 -0.4 2,444,233 - Dsui_2289 0.53 +0.6 2,444,255 + -1.0
Or see this region's nucleotide sequence