Strain Fitness in Dechlorosoma suillum PS around Dsui_2026

Experiment: ALP with perchlorate 12 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2025 and Dsui_2026 are separated by 9 nucleotidesDsui_2026 and Dsui_2027 are separated by 17 nucleotides Dsui_2025: Dsui_2025 - RND family efflux transporter, MFP subunit, at 2,141,088 to 2,142,275 _2025 Dsui_2026: Dsui_2026 - hydrophobe/amphiphile efflux-1 (HAE1) family transporter, at 2,142,285 to 2,145,482 _2026 Dsui_2027: Dsui_2027 - efflux transporter, outer membrane factor lipoprotein, NodT family, at 2,145,500 to 2,147,065 _2027 Position (kb) 2142 2143 2144 2145 2146Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2141.296 kb on + strand, within Dsui_2025at 2141.381 kb on + strandat 2141.401 kb on - strandat 2141.475 kb on + strand, within Dsui_2025at 2141.577 kb on - strand, within Dsui_2025at 2141.598 kb on - strand, within Dsui_2025at 2141.599 kb on - strandat 2141.665 kb on + strand, within Dsui_2025at 2141.673 kb on - strandat 2141.710 kb on + strandat 2141.755 kb on + strand, within Dsui_2025at 2141.885 kb on - strandat 2141.961 kb on + strand, within Dsui_2025at 2142.008 kb on + strand, within Dsui_2025at 2142.008 kb on + strand, within Dsui_2025at 2142.269 kb on + strandat 2142.269 kb on + strandat 2142.278 kb on - strandat 2142.329 kb on + strandat 2142.335 kb on + strandat 2142.402 kb on - strandat 2142.430 kb on + strandat 2142.448 kb on + strandat 2142.535 kb on - strandat 2142.609 kb on + strandat 2142.693 kb on + strandat 2142.700 kb on + strand, within Dsui_2026at 2142.700 kb on + strandat 2142.702 kb on - strand, within Dsui_2026at 2142.742 kb on + strandat 2142.757 kb on + strandat 2142.913 kb on + strand, within Dsui_2026at 2143.209 kb on - strand, within Dsui_2026at 2143.249 kb on + strandat 2143.249 kb on + strand, within Dsui_2026at 2143.270 kb on + strand, within Dsui_2026at 2143.314 kb on + strand, within Dsui_2026at 2143.322 kb on - strandat 2143.488 kb on + strand, within Dsui_2026at 2143.727 kb on + strandat 2143.744 kb on + strand, within Dsui_2026at 2143.939 kb on + strand, within Dsui_2026at 2143.993 kb on + strandat 2144.014 kb on + strandat 2144.022 kb on - strand, within Dsui_2026at 2144.042 kb on + strand, within Dsui_2026at 2144.063 kb on - strandat 2144.089 kb on + strand, within Dsui_2026at 2144.330 kb on + strandat 2144.386 kb on - strand, within Dsui_2026at 2144.396 kb on - strand, within Dsui_2026at 2144.493 kb on + strand, within Dsui_2026at 2144.532 kb on - strandat 2144.572 kb on + strandat 2144.572 kb on + strand, within Dsui_2026at 2144.572 kb on + strand, within Dsui_2026at 2144.572 kb on + strandat 2144.621 kb on + strandat 2144.623 kb on - strandat 2144.629 kb on - strandat 2144.696 kb on + strand, within Dsui_2026at 2144.859 kb on - strand, within Dsui_2026at 2144.876 kb on + strandat 2144.935 kb on - strand, within Dsui_2026at 2145.097 kb on + strand, within Dsui_2026at 2145.176 kb on - strandat 2145.326 kb on + strandat 2145.329 kb on - strandat 2145.343 kb on + strandat 2145.397 kb on + strandat 2145.409 kb on - strandat 2145.471 kb on - strandat 2145.490 kb on + strandat 2145.538 kb on + strandat 2145.633 kb on + strandat 2145.734 kb on + strandat 2145.768 kb on - strand, within Dsui_2027at 2145.790 kb on + strand, within Dsui_2027at 2145.798 kb on - strandat 2145.894 kb on - strandat 2146.116 kb on - strandat 2146.130 kb on - strandat 2146.143 kb on + strandat 2146.151 kb on - strandat 2146.199 kb on + strandat 2146.450 kb on + strand, within Dsui_2027

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with perchlorate 12 mM
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2,141,296 + Dsui_2025 0.18 -2.0
2,141,381 + -0.2
2,141,401 - +0.8
2,141,475 + Dsui_2025 0.33 -2.4
2,141,577 - Dsui_2025 0.41 -1.2
2,141,598 - Dsui_2025 0.43 -0.2
2,141,599 - +0.8
2,141,665 + Dsui_2025 0.49 -1.6
2,141,673 - +0.8
2,141,710 + +0.8
2,141,755 + Dsui_2025 0.56 +0.8
2,141,885 - +0.8
2,141,961 + Dsui_2025 0.73 +0.8
2,142,008 + Dsui_2025 0.77 +0.8
2,142,008 + Dsui_2025 0.77 +0.8
2,142,269 + -1.2
2,142,269 + -0.2
2,142,278 - -0.2
2,142,329 + -0.2
2,142,335 + +0.8
2,142,402 - -0.2
2,142,430 + -0.2
2,142,448 + -1.2
2,142,535 - +0.8
2,142,609 + +0.8
2,142,693 + -0.2
2,142,700 + Dsui_2026 0.13 -0.2
2,142,700 + -0.2
2,142,702 - Dsui_2026 0.13 -0.8
2,142,742 + +0.8
2,142,757 + +0.8
2,142,913 + Dsui_2026 0.20 +0.8
2,143,209 - Dsui_2026 0.29 -0.2
2,143,249 + -0.2
2,143,249 + Dsui_2026 0.30 -2.0
2,143,270 + Dsui_2026 0.31 +0.8
2,143,314 + Dsui_2026 0.32 -1.2
2,143,322 - +0.8
2,143,488 + Dsui_2026 0.38 -1.2
2,143,727 + -0.2
2,143,744 + Dsui_2026 0.46 -1.2
2,143,939 + Dsui_2026 0.52 -1.2
2,143,993 + +0.8
2,144,014 + -0.2
2,144,022 - Dsui_2026 0.54 -1.8
2,144,042 + Dsui_2026 0.55 +0.8
2,144,063 - -0.2
2,144,089 + Dsui_2026 0.56 +0.8
2,144,330 + +0.8
2,144,386 - Dsui_2026 0.66 +0.6
2,144,396 - Dsui_2026 0.66 -0.8
2,144,493 + Dsui_2026 0.69 +0.8
2,144,532 - +2.4
2,144,572 + +0.8
2,144,572 + Dsui_2026 0.72 -1.2
2,144,572 + Dsui_2026 0.72 -1.2
2,144,572 + -0.2
2,144,621 + +0.8
2,144,623 - -0.2
2,144,629 - +0.8
2,144,696 + Dsui_2026 0.75 +0.8
2,144,859 - Dsui_2026 0.80 +0.8
2,144,876 + +0.8
2,144,935 - Dsui_2026 0.83 +0.8
2,145,097 + Dsui_2026 0.88 -1.6
2,145,176 - +0.8
2,145,326 + -0.2
2,145,329 - -0.2
2,145,343 + -1.8
2,145,397 + +0.8
2,145,409 - +0.8
2,145,471 - +0.8
2,145,490 + -0.2
2,145,538 + -0.2
2,145,633 + -0.2
2,145,734 + -0.2
2,145,768 - Dsui_2027 0.17 -1.6
2,145,790 + Dsui_2027 0.19 -3.2
2,145,798 - +0.8
2,145,894 - -0.2
2,146,116 - -0.8
2,146,130 - +0.8
2,146,143 + +0.8
2,146,151 - +0.8
2,146,199 + +0.8
2,146,450 + Dsui_2027 0.61 -1.2

Or see this region's nucleotide sequence