Experiment: ALP with perchlorate 12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0193 and Dsui_0194 overlap by 29 nucleotides Dsui_0194 and Dsui_0195 are separated by 102 nucleotides
Dsui_0193: Dsui_0193 - putative phage protein, putative large terminase, at 191,850 to 193,328
_0193
Dsui_0194: Dsui_0194 - phage putative head morphogenesis protein, SPP1 gp7 family, at 193,300 to 196,020
_0194
Dsui_0195: Dsui_0195 - Caudovirus prohead protease, at 196,123 to 197,463
_0195
Position (kb) 193
194
195
196
197 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 192.374 kb on + strand, within Dsui_0193 at 192.543 kb on + strand, within Dsui_0193 at 192.611 kb on + strand, within Dsui_0193 at 192.611 kb on + strand, within Dsui_0193 at 192.626 kb on + strand, within Dsui_0193 at 192.812 kb on + strand, within Dsui_0193 at 192.834 kb on - strand, within Dsui_0193 at 192.837 kb on + strand, within Dsui_0193 at 192.953 kb on + strand, within Dsui_0193 at 193.032 kb on - strand, within Dsui_0193 at 193.036 kb on + strand, within Dsui_0193 at 193.071 kb on + strand, within Dsui_0193 at 193.123 kb on - strand, within Dsui_0193 at 193.225 kb on - strand at 193.397 kb on - strand at 193.707 kb on + strand, within Dsui_0194 at 193.707 kb on + strand, within Dsui_0194 at 193.726 kb on + strand at 193.734 kb on - strand, within Dsui_0194 at 193.856 kb on + strand, within Dsui_0194 at 193.927 kb on - strand, within Dsui_0194 at 193.974 kb on - strand, within Dsui_0194 at 194.118 kb on + strand, within Dsui_0194 at 194.138 kb on + strand, within Dsui_0194 at 194.138 kb on - strand, within Dsui_0194 at 194.146 kb on - strand, within Dsui_0194 at 194.169 kb on - strand, within Dsui_0194 at 194.235 kb on - strand, within Dsui_0194 at 194.377 kb on - strand, within Dsui_0194 at 194.456 kb on + strand, within Dsui_0194 at 194.456 kb on + strand at 194.493 kb on - strand, within Dsui_0194 at 194.753 kb on - strand, within Dsui_0194 at 195.036 kb on - strand, within Dsui_0194 at 195.036 kb on - strand, within Dsui_0194 at 195.204 kb on + strand, within Dsui_0194 at 195.231 kb on - strand, within Dsui_0194 at 195.263 kb on - strand, within Dsui_0194 at 195.278 kb on + strand, within Dsui_0194 at 195.337 kb on - strand, within Dsui_0194 at 195.630 kb on + strand, within Dsui_0194 at 195.630 kb on + strand at 195.638 kb on - strand, within Dsui_0194 at 195.727 kb on + strand, within Dsui_0194 at 195.838 kb on + strand at 195.857 kb on - strand at 196.075 kb on + strand at 196.163 kb on - strand at 196.184 kb on + strand at 196.192 kb on + strand at 196.205 kb on - strand at 196.208 kb on + strand at 196.470 kb on + strand, within Dsui_0195 at 196.698 kb on - strand, within Dsui_0195 at 196.712 kb on - strand, within Dsui_0195 at 196.757 kb on + strand, within Dsui_0195 at 196.775 kb on - strand, within Dsui_0195 at 196.933 kb on - strand, within Dsui_0195
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 12 mM remove 192,374 + Dsui_0193 0.35 -1.3 192,543 + Dsui_0193 0.47 +0.3 192,611 + Dsui_0193 0.51 +0.3 192,611 + Dsui_0193 0.51 +0.3 192,626 + Dsui_0193 0.52 +0.3 192,812 + Dsui_0193 0.65 -0.7 192,834 - Dsui_0193 0.67 +0.3 192,837 + Dsui_0193 0.67 -0.7 192,953 + Dsui_0193 0.75 +0.3 193,032 - Dsui_0193 0.80 -0.7 193,036 + Dsui_0193 0.80 -0.7 193,071 + Dsui_0193 0.83 -1.7 193,123 - Dsui_0193 0.86 -2.3 193,225 - +0.3 193,397 - -1.7 193,707 + Dsui_0194 0.15 -2.0 193,707 + Dsui_0194 0.15 +0.1 193,726 + +0.3 193,734 - Dsui_0194 0.16 -1.3 193,856 + Dsui_0194 0.20 -3.3 193,927 - Dsui_0194 0.23 -0.7 193,974 - Dsui_0194 0.25 -1.3 194,118 + Dsui_0194 0.30 -0.7 194,138 + Dsui_0194 0.31 -0.7 194,138 - Dsui_0194 0.31 -1.3 194,146 - Dsui_0194 0.31 -1.3 194,169 - Dsui_0194 0.32 -1.7 194,235 - Dsui_0194 0.34 -0.7 194,377 - Dsui_0194 0.40 +0.3 194,456 + Dsui_0194 0.42 -1.7 194,456 + +0.3 194,493 - Dsui_0194 0.44 +0.3 194,753 - Dsui_0194 0.53 +0.3 195,036 - Dsui_0194 0.64 +0.3 195,036 - Dsui_0194 0.64 -1.3 195,204 + Dsui_0194 0.70 -1.7 195,231 - Dsui_0194 0.71 -1.3 195,263 - Dsui_0194 0.72 +0.3 195,278 + Dsui_0194 0.73 +0.3 195,337 - Dsui_0194 0.75 -2.5 195,630 + Dsui_0194 0.86 -0.7 195,630 + +0.3 195,638 - Dsui_0194 0.86 +0.3 195,727 + Dsui_0194 0.89 +0.3 195,838 + -0.7 195,857 - -2.3 196,075 + +0.3 196,163 - +0.3 196,184 + +0.3 196,192 + -1.9 196,205 - -1.7 196,208 + +0.3 196,470 + Dsui_0195 0.26 -2.5 196,698 - Dsui_0195 0.43 -2.7 196,712 - Dsui_0195 0.44 +0.3 196,757 + Dsui_0195 0.47 -2.3 196,775 - Dsui_0195 0.49 +0.3 196,933 - Dsui_0195 0.60 -0.7
Or see this region's nucleotide sequence