Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02165 and BWI76_RS02170 are separated by 59 nucleotides BWI76_RS02170 and BWI76_RS02175 are separated by 364 nucleotides BWI76_RS02175 and BWI76_RS02180 are separated by 69 nucleotides
BWI76_RS02165: BWI76_RS02165 - D-allose transporter subunit, at 450,277 to 451,212
_RS02165
BWI76_RS02170: BWI76_RS02170 - MurR/RpiR family transcriptional regulator, at 451,272 to 452,159
_RS02170
BWI76_RS02175: BWI76_RS02175 - ribose 5-phosphate isomerase B, at 452,524 to 452,973
_RS02175
BWI76_RS02180: BWI76_RS02180 - hypothetical protein, at 453,043 to 453,375
_RS02180
Position (kb) 451
452
453 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 450.291 kb on + strand at 450.291 kb on + strand at 450.296 kb on + strand at 450.296 kb on + strand at 450.305 kb on + strand at 450.305 kb on + strand at 450.308 kb on - strand at 450.313 kb on + strand at 450.313 kb on + strand at 450.313 kb on + strand at 450.313 kb on - strand at 450.320 kb on + strand at 450.320 kb on + strand at 450.320 kb on + strand at 450.320 kb on + strand at 450.320 kb on + strand at 450.320 kb on + strand at 450.320 kb on + strand at 450.321 kb on - strand at 450.328 kb on - strand at 450.328 kb on - strand at 450.328 kb on - strand at 450.328 kb on - strand at 450.328 kb on - strand at 450.328 kb on - strand at 450.329 kb on + strand at 450.337 kb on - strand at 450.341 kb on - strand at 450.349 kb on + strand at 450.357 kb on - strand at 450.357 kb on - strand at 450.369 kb on + strand at 450.369 kb on + strand at 450.369 kb on - strand at 450.370 kb on - strand at 450.377 kb on - strand, within BWI76_RS02165 at 450.377 kb on - strand, within BWI76_RS02165 at 450.377 kb on - strand, within BWI76_RS02165 at 450.378 kb on - strand, within BWI76_RS02165 at 450.421 kb on + strand, within BWI76_RS02165 at 450.421 kb on + strand, within BWI76_RS02165 at 450.512 kb on + strand, within BWI76_RS02165 at 450.569 kb on + strand, within BWI76_RS02165 at 450.606 kb on + strand, within BWI76_RS02165 at 450.670 kb on + strand, within BWI76_RS02165 at 450.755 kb on - strand, within BWI76_RS02165 at 450.769 kb on + strand, within BWI76_RS02165 at 450.802 kb on - strand, within BWI76_RS02165 at 450.913 kb on - strand, within BWI76_RS02165 at 450.945 kb on + strand, within BWI76_RS02165 at 450.952 kb on + strand, within BWI76_RS02165 at 450.960 kb on - strand, within BWI76_RS02165 at 450.960 kb on - strand, within BWI76_RS02165 at 450.984 kb on - strand, within BWI76_RS02165 at 450.991 kb on - strand, within BWI76_RS02165 at 451.044 kb on + strand, within BWI76_RS02165 at 451.081 kb on - strand, within BWI76_RS02165 at 451.084 kb on + strand, within BWI76_RS02165 at 451.094 kb on + strand, within BWI76_RS02165 at 451.115 kb on + strand, within BWI76_RS02165 at 451.125 kb on + strand at 451.128 kb on + strand at 451.130 kb on + strand at 451.130 kb on + strand at 451.136 kb on - strand at 451.138 kb on - strand at 451.143 kb on + strand at 451.157 kb on + strand at 451.159 kb on + strand at 451.159 kb on + strand at 451.164 kb on + strand at 451.164 kb on + strand at 451.164 kb on + strand at 451.164 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.165 kb on + strand at 451.169 kb on + strand at 451.169 kb on + strand at 451.171 kb on + strand at 451.172 kb on + strand at 451.172 kb on + strand at 451.172 kb on - strand at 451.172 kb on - strand at 451.172 kb on - strand at 451.172 kb on - strand at 451.172 kb on - strand at 451.172 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.173 kb on - strand at 451.174 kb on + strand at 451.177 kb on - strand at 451.179 kb on - strand at 451.179 kb on - strand at 451.180 kb on - strand at 451.214 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.226 kb on + strand at 451.227 kb on - strand at 451.228 kb on + strand at 451.229 kb on - strand at 451.231 kb on + strand at 451.231 kb on + strand at 451.231 kb on + strand at 451.231 kb on + strand at 451.231 kb on + strand at 451.231 kb on + strand at 451.231 kb on + strand at 451.234 kb on - strand at 451.234 kb on - strand at 451.234 kb on - strand at 451.234 kb on - strand at 451.234 kb on - strand at 451.234 kb on - strand at 451.236 kb on + strand at 451.236 kb on + strand at 451.236 kb on + strand at 451.236 kb on + strand at 451.236 kb on + strand at 451.236 kb on + strand at 451.239 kb on - strand at 451.239 kb on - strand at 451.239 kb on - strand at 451.241 kb on + strand at 451.244 kb on - strand at 451.244 kb on - strand at 451.246 kb on - strand at 451.246 kb on - strand at 451.246 kb on - strand at 451.254 kb on - strand at 451.345 kb on + strand at 451.345 kb on + strand at 451.345 kb on + strand at 451.348 kb on - strand at 451.353 kb on - strand at 451.353 kb on - strand at 451.353 kb on - strand at 451.353 kb on - strand at 451.363 kb on - strand, within BWI76_RS02170 at 451.363 kb on - strand, within BWI76_RS02170 at 451.406 kb on + strand, within BWI76_RS02170 at 451.434 kb on + strand, within BWI76_RS02170 at 451.481 kb on + strand, within BWI76_RS02170 at 451.481 kb on + strand, within BWI76_RS02170 at 451.489 kb on - strand, within BWI76_RS02170 at 451.490 kb on + strand, within BWI76_RS02170 at 451.491 kb on + strand, within BWI76_RS02170 at 451.491 kb on + strand, within BWI76_RS02170 at 451.491 kb on + strand, within BWI76_RS02170 at 451.491 kb on + strand at 451.491 kb on + strand, within BWI76_RS02170 at 451.491 kb on + strand, within BWI76_RS02170 at 451.498 kb on - strand, within BWI76_RS02170 at 451.498 kb on - strand, within BWI76_RS02170 at 451.498 kb on - strand, within BWI76_RS02170 at 451.499 kb on - strand, within BWI76_RS02170 at 451.499 kb on - strand, within BWI76_RS02170 at 451.499 kb on - strand, within BWI76_RS02170 at 451.499 kb on - strand, within BWI76_RS02170 at 451.560 kb on + strand, within BWI76_RS02170 at 451.574 kb on - strand, within BWI76_RS02170 at 451.581 kb on + strand, within BWI76_RS02170 at 451.581 kb on + strand, within BWI76_RS02170 at 451.581 kb on + strand, within BWI76_RS02170 at 451.582 kb on + strand, within BWI76_RS02170 at 451.589 kb on - strand, within BWI76_RS02170 at 451.589 kb on - strand, within BWI76_RS02170 at 451.592 kb on - strand, within BWI76_RS02170 at 451.602 kb on + strand, within BWI76_RS02170 at 451.608 kb on - strand, within BWI76_RS02170 at 451.632 kb on - strand, within BWI76_RS02170 at 451.642 kb on + strand at 451.722 kb on + strand, within BWI76_RS02170 at 451.743 kb on - strand, within BWI76_RS02170 at 451.820 kb on - strand, within BWI76_RS02170 at 451.884 kb on + strand, within BWI76_RS02170 at 451.892 kb on - strand, within BWI76_RS02170 at 451.963 kb on - strand, within BWI76_RS02170 at 452.105 kb on + strand at 452.125 kb on - strand at 452.127 kb on + strand at 452.162 kb on - strand at 452.413 kb on + strand at 452.566 kb on - strand at 452.611 kb on - strand at 452.664 kb on - strand, within BWI76_RS02175 at 452.786 kb on - strand, within BWI76_RS02175 at 452.813 kb on - strand, within BWI76_RS02175 at 452.841 kb on - strand, within BWI76_RS02175 at 452.869 kb on - strand, within BWI76_RS02175 at 453.005 kb on + strand at 453.018 kb on - strand at 453.023 kb on + strand at 453.051 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 450,291 + -0.7 450,291 + +0.8 450,296 + -2.3 450,296 + +0.8 450,305 + -1.6 450,305 + +0.2 450,308 - +1.0 450,313 + +0.1 450,313 + +0.1 450,313 + +0.4 450,313 - +0.4 450,320 + +0.0 450,320 + +0.5 450,320 + +0.1 450,320 + -0.1 450,320 + +0.3 450,320 + +0.6 450,320 + -0.8 450,321 - -0.4 450,328 - -0.7 450,328 - -0.2 450,328 - -0.1 450,328 - +0.2 450,328 - -0.3 450,328 - +0.2 450,329 + -0.5 450,337 - -0.2 450,341 - +0.3 450,349 + -0.0 450,357 - -0.5 450,357 - -1.1 450,369 + -0.3 450,369 + -0.2 450,369 - -0.8 450,370 - -0.1 450,377 - BWI76_RS02165 0.11 -0.7 450,377 - BWI76_RS02165 0.11 +0.2 450,377 - BWI76_RS02165 0.11 +0.3 450,378 - BWI76_RS02165 0.11 -0.3 450,421 + BWI76_RS02165 0.15 +0.6 450,421 + BWI76_RS02165 0.15 +0.1 450,512 + BWI76_RS02165 0.25 +0.7 450,569 + BWI76_RS02165 0.31 +0.3 450,606 + BWI76_RS02165 0.35 +0.2 450,670 + BWI76_RS02165 0.42 -0.3 450,755 - BWI76_RS02165 0.51 +0.3 450,769 + BWI76_RS02165 0.53 +0.9 450,802 - BWI76_RS02165 0.56 -0.5 450,913 - BWI76_RS02165 0.68 +0.8 450,945 + BWI76_RS02165 0.71 +0.7 450,952 + BWI76_RS02165 0.72 -0.3 450,960 - BWI76_RS02165 0.73 +0.0 450,960 - BWI76_RS02165 0.73 +0.1 450,984 - BWI76_RS02165 0.76 +0.7 450,991 - BWI76_RS02165 0.76 +0.1 451,044 + BWI76_RS02165 0.82 +0.2 451,081 - BWI76_RS02165 0.86 -0.7 451,084 + BWI76_RS02165 0.86 +0.4 451,094 + BWI76_RS02165 0.87 +0.6 451,115 + BWI76_RS02165 0.90 +0.4 451,125 + -1.3 451,128 + +0.1 451,130 + +1.1 451,130 + -0.1 451,136 - +0.1 451,138 - -0.4 451,143 + -0.5 451,157 + +0.4 451,159 + -0.7 451,159 + +0.7 451,164 + +0.7 451,164 + +0.9 451,164 + -0.5 451,164 + +0.4 451,165 + -0.1 451,165 + +0.2 451,165 + -0.3 451,165 + -0.4 451,165 + -0.7 451,165 + -0.3 451,165 + +0.1 451,165 + +1.4 451,165 + -0.3 451,165 + +0.6 451,165 + -0.1 451,165 + -0.2 451,165 + +0.5 451,165 + -0.0 451,165 + +0.5 451,165 + +0.5 451,165 + -0.6 451,165 + -0.5 451,165 + +0.7 451,165 + -0.8 451,165 + +0.8 451,165 + +0.8 451,165 + -0.3 451,169 + -0.1 451,169 + -0.4 451,171 + +0.5 451,172 + -0.6 451,172 + +0.7 451,172 - -0.8 451,172 - +0.1 451,172 - -0.9 451,172 - +0.2 451,172 - +0.8 451,172 - -1.3 451,173 - +3.0 451,173 - -1.3 451,173 - -0.5 451,173 - +1.0 451,173 - +0.2 451,173 - -0.5 451,173 - -0.5 451,173 - +0.1 451,173 - +0.0 451,173 - +0.9 451,173 - -1.5 451,173 - +1.0 451,173 - +0.6 451,173 - -1.6 451,173 - -0.2 451,173 - -0.7 451,173 - -0.3 451,173 - +0.6 451,173 - -0.5 451,173 - +1.0 451,174 + +0.2 451,177 - +1.4 451,179 - +1.1 451,179 - +1.7 451,180 - +2.0 451,214 + +0.1 451,226 + +0.3 451,226 + -0.1 451,226 + -0.3 451,226 + +0.2 451,226 + -0.0 451,226 + +0.1 451,227 - +0.1 451,228 + -0.0 451,229 - -0.8 451,231 + +3.6 451,231 + -0.3 451,231 + +0.8 451,231 + -0.3 451,231 + -0.1 451,231 + -0.3 451,231 + +0.7 451,234 - +0.0 451,234 - -0.4 451,234 - +1.1 451,234 - -0.6 451,234 - -0.4 451,234 - -0.3 451,236 + -0.3 451,236 + -0.0 451,236 + +0.5 451,236 + +0.1 451,236 + +0.5 451,236 + -0.1 451,239 - -0.1 451,239 - -0.1 451,239 - -1.6 451,241 + +0.4 451,244 - -2.6 451,244 - +0.4 451,246 - -1.2 451,246 - +0.1 451,246 - -0.7 451,254 - +1.3 451,345 + -0.4 451,345 + +0.4 451,345 + -1.8 451,348 - +0.0 451,353 - +0.0 451,353 - -0.2 451,353 - -0.1 451,353 - -0.3 451,363 - BWI76_RS02170 0.10 -0.6 451,363 - BWI76_RS02170 0.10 -0.3 451,406 + BWI76_RS02170 0.15 -0.3 451,434 + BWI76_RS02170 0.18 -0.7 451,481 + BWI76_RS02170 0.24 +0.8 451,481 + BWI76_RS02170 0.24 -0.1 451,489 - BWI76_RS02170 0.24 -0.4 451,490 + BWI76_RS02170 0.25 -0.8 451,491 + BWI76_RS02170 0.25 -0.8 451,491 + BWI76_RS02170 0.25 -0.3 451,491 + BWI76_RS02170 0.25 -0.1 451,491 + +1.3 451,491 + BWI76_RS02170 0.25 -1.2 451,491 + BWI76_RS02170 0.25 -0.2 451,498 - BWI76_RS02170 0.25 +0.3 451,498 - BWI76_RS02170 0.25 -1.1 451,498 - BWI76_RS02170 0.25 +0.0 451,499 - BWI76_RS02170 0.26 -0.5 451,499 - BWI76_RS02170 0.26 -0.3 451,499 - BWI76_RS02170 0.26 -0.2 451,499 - BWI76_RS02170 0.26 -0.6 451,560 + BWI76_RS02170 0.32 +0.4 451,574 - BWI76_RS02170 0.34 -1.8 451,581 + BWI76_RS02170 0.35 -2.5 451,581 + BWI76_RS02170 0.35 -0.6 451,581 + BWI76_RS02170 0.35 -1.3 451,582 + BWI76_RS02170 0.35 -1.6 451,589 - BWI76_RS02170 0.36 +0.2 451,589 - BWI76_RS02170 0.36 -0.5 451,592 - BWI76_RS02170 0.36 -0.5 451,602 + BWI76_RS02170 0.37 +0.2 451,608 - BWI76_RS02170 0.38 -0.0 451,632 - BWI76_RS02170 0.41 -0.1 451,642 + +0.0 451,722 + BWI76_RS02170 0.51 -0.2 451,743 - BWI76_RS02170 0.53 +0.5 451,820 - BWI76_RS02170 0.62 +0.1 451,884 + BWI76_RS02170 0.69 +0.1 451,892 - BWI76_RS02170 0.70 -0.3 451,963 - BWI76_RS02170 0.78 -0.4 452,105 + -0.8 452,125 - +0.1 452,127 + -0.3 452,162 - +0.3 452,413 + -0.1 452,566 - +0.7 452,611 - +1.0 452,664 - BWI76_RS02175 0.31 +0.7 452,786 - BWI76_RS02175 0.58 -1.0 452,813 - BWI76_RS02175 0.64 -0.5 452,841 - BWI76_RS02175 0.70 +0.4 452,869 - BWI76_RS02175 0.77 -0.2 453,005 + +1.3 453,018 - -1.0 453,023 + -0.9 453,051 + +0.1
Or see this region's nucleotide sequence