Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4074

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
6,497	-				-0.1
6,504	+				-0.5
6,504	+				-0.7
6,504	+				+0.2
6,504	+				+1.1
6,505	+				+0.7
6,512	-				+0.4
6,519	+				+1.6
6,522	-				+0.4
6,522	-				-0.1
6,525	+				-0.1
6,542	-				-0.1
6,550	-				+0.3
6,581	+				+0.3
6,581	+				+0.9
6,581	+				-0.3
6,581	+				+0.3
6,581	+				+0.4
6,589	-				-0.1
6,589	-				-0.4
6,595	+				-0.4
6,600	+				-0.5
6,603	-				+0.3
6,621	+				-0.7
6,622	+				-1.1
6,629	-				+0.0
6,639	-				+0.1
6,663	+				-2.6
6,671	-				-0.4
6,673	+				-0.5
6,691	-				-0.3
6,705	+				+0.7
6,705	+				-0.0
6,705	+				-0.3
6,705	+				+1.0
6,705	+				+1.9
6,705	+				+0.7
6,713	-				+1.6
6,713	-				-0.3
6,713	-				+0.0
6,713	-				+0.7
6,713	-				+0.3
6,715	+				+0.1
6,748	-				-0.9
6,748	-				-1.1
6,748	-				-0.0
6,755	+				+0.0
6,755	+				-1.0
6,759	+				-0.6
6,759	+				-0.1
6,759	+				-1.0
6,759	+				+0.0
6,759	+				-0.2
6,760	+				+0.1
6,763	-				-0.1
6,763	-				-0.8
6,763	-				-0.7
6,763	-				+0.0
6,767	-				+0.4
6,767	-				+0.9
6,767	-				-0.3
6,767	-				-0.3
6,768	-				-0.9
6,771	+				+0.3
6,771	+				+0.2
6,771	+				+0.8
6,771	+				+1.2
6,771	+				+0.1
6,771	+				-0.3
6,771	+				-0.5
6,771	+				-0.9
6,771	+				+0.6
6,771	+				-0.4
6,771	+				-0.5
6,771	+				-0.7
6,771	+				+0.4
6,772	-				+0.1
6,772	-				+0.8
6,779	-				-0.2
6,779	-				-0.1
6,779	-				+0.0
6,779	-				-0.0
6,779	-				-0.7
6,779	-				-2.0
6,796	+				-0.9
6,804	-				+0.2
6,806	+				-0.1
6,809	+				-0.2
6,809	+				+0.1
6,809	+				-1.4
6,811	+				-0.3
6,817	-				+0.2
6,817	-				+0.1
6,817	-				+0.1
6,819	+				+1.0
6,819	+				-0.1
6,827	-				-0.1
6,827	-				+0.0
6,827	-				-0.6
6,831	+				-0.3
6,852	-				-0.5
6,854	+				-0.2
6,856	+				-0.2
6,856	+				-0.5
6,862	-				-0.3
6,864	-				-0.1
6,864	-				-0.3
6,864	-				+0.1
6,864	-				+0.1
6,864	-				-1.1
6,864	-				+0.1
6,864	-				+0.3
6,864	-				-0.3
6,864	-				-0.6
6,881	+				-0.7
6,905	-				+0.0
6,924	-				+1.3
6,927	+				+0.4
6,971	-				+0.2
6,973	-				+0.2
6,983	+				-0.9
6,988	+				-0.2
6,991	-				-1.3
7,004	+				+0.6
7,004	+				-0.4
7,009	+				-0.9
7,009	+				-0.0
7,009	+				-1.2
7,009	+				+1.6
7,009	+				-0.7
7,009	+				+0.9
7,009	+				-1.7
7,017	-				-0.7
7,017	-				-0.1
7,017	-				-0.6
7,017	-				+0.9
7,056	+				+0.3
7,060	+				+0.5
7,062	-				-0.2
7,062	-				-0.1
7,064	-				+1.1
7,068	-				-0.7
7,068	-				-1.0
7,080	+				-0.2
7,088	-				-0.1
7,102	-				+0.2
7,104	+				-0.1
7,104	+				+0.2
7,104	+				-0.0
7,105	+				-0.1
7,111	-				-1.3
7,112	-				+0.0
7,112	-				-1.3
7,112	-				-1.0
7,112	-				+0.3
7,112	-				-0.9
7,112	-				-0.2
7,112	-				-1.2
7,112	-				-0.1
7,112	-				+0.3
7,113	-				-0.3
7,117	-				+1.0
7,117	-				+0.5
7,117	-				-0.0
7,120	+				+1.3
7,120	+				-0.3
7,128	+				+0.1
7,128	+				-0.0
7,149	-				-1.5
7,176	+				-0.5
7,179	-				+2.3
7,184	-				-0.4
7,184	-				+0.7
7,194	-				-0.5
7,203	+				-0.7
7,211	-				-0.2
7,211	-				+0.2
7,211	-				+0.8
7,254	-				-1.0
7,270	+				-0.2
7,278	-				-0.5
7,278	-				+0.7
7,307	+				+0.0
7,307	+				+0.4
7,307	+				-1.3
7,308	+				+0.5
7,315	-				+0.3
7,315	-				+0.2
7,316	-				+0.1
7,321	-				-0.3
7,329	+				-0.2
7,329	+				+0.3
7,337	-				-0.4
7,381	+				-0.4
7,432	+				-0.5
7,434	+				+0.6
7,434	+				-0.1
7,446	+				-0.5
7,446	+				+1.3
7,450	-				+0.1
7,454	-				+0.0
7,462	+				+0.1
7,462	+				+0.5
7,470	-				+0.3
7,481	-				-0.8
7,485	-				+0.3
7,486	-				-2.0
7,492	-				-0.7
7,492	-				-0.0
7,511	+				+0.5
7,511	+				+1.1
7,537	+		Dshi_4074	0.16	-0.7
7,543	+		Dshi_4074	0.19	-0.5
7,555	-		Dshi_4074	0.23	+0.7
7,582	+		Dshi_4074	0.33	+0.3
7,590	-		Dshi_4074	0.36	-0.4
7,590	-		Dshi_4074	0.36	+0.1
7,590	-		Dshi_4074	0.36	+0.3
7,597	+		Dshi_4074	0.38	+0.3
7,604	-		Dshi_4074	0.41	-0.0
7,609	-		Dshi_4074	0.43	-0.1
7,622	+		Dshi_4074	0.48	-1.0
7,622	+		Dshi_4074	0.48	+0.1
7,622	+		Dshi_4074	0.48	-0.8
7,630	-		Dshi_4074	0.51	-0.0
7,630	-		Dshi_4074	0.51	-0.1
7,633	+		Dshi_4074	0.52	+0.1
7,640	+		Dshi_4074	0.54	+0.2
7,650	+		Dshi_4074	0.58	+0.9
7,660	+		Dshi_4074	0.62	-0.9
7,665	+		Dshi_4074	0.63	-0.0
7,665	+		Dshi_4074	0.63	-0.0
7,673	-		Dshi_4074	0.66	-0.4
7,673	-		Dshi_4074	0.66	-0.1
7,673	-		Dshi_4074	0.66	+0.1
7,673	-		Dshi_4074	0.66	-0.1
7,673	-		Dshi_4074	0.66	-0.1
7,683	-		Dshi_4074	0.70	-0.5
7,694	+		Dshi_4074	0.74	-0.4
7,694	+		Dshi_4074	0.74	-0.3
7,694	+		Dshi_4074	0.74	-0.1
7,694	+		Dshi_4074	0.74	-0.1
7,699	+		Dshi_4074	0.76	+0.1
7,707	-		Dshi_4074	0.79	-2.6
7,707	-		Dshi_4074	0.79	-0.9
7,714	-		Dshi_4074	0.81	-0.4
7,714	-		Dshi_4074	0.81	-0.5
7,715	-		Dshi_4074	0.82	-0.3
7,716	+		Dshi_4074	0.82	+0.7
7,722	+		Dshi_4074	0.84	-0.3
7,722	-		Dshi_4074	0.84	-0.2
7,730	+		Dshi_4074	0.87	-0.7
7,747	+				-0.7
7,753	-				+0.0
7,753	-				-0.8
7,761	+				-0.3
7,771	-				+0.0
7,785	+				-0.1
7,785	+				-0.4
7,791	-				+0.1
7,791	-				-0.7
7,793	-				-0.7
7,793	-				-0.7
7,805	-				-0.4
7,807	+				+0.6
7,808	+				+0.1
7,819	+				-0.1
7,819	+				-0.3
7,819	+				-0.0
7,819	+				+0.2
7,819	+				-0.2
7,819	+				+0.4
7,819	+				-0.4
7,819	+				-0.7
7,826	+				-0.9
7,827	-				-1.1
7,827	-				-1.4
7,827	-				-0.9
7,827	-				-0.4
7,827	-				-0.3
7,827	-				-0.1
7,827	-				+0.1
7,827	-				-0.5
7,827	-				-0.6
7,827	-				+0.2
7,836	+				+0.3
7,836	+				+0.4
7,844	-				-0.1
7,844	-				-0.2
7,844	-				-0.2
7,846	+				+0.1
7,849	+				-0.9
7,850	+				+0.5
7,858	-				-0.3
7,872	-				-0.7
7,875	-				+0.0
7,875	-				-0.2
7,902	+				-0.8
7,908	-				+0.2
7,908	-				-0.9
7,908	-				-0.6
7,910	-				+0.0
7,910	-				-1.0
7,910	-				-0.7
7,910	-				-0.3
7,915	+				+0.3
7,915	+				-0.2
7,915	+				+0.0
7,915	+				+0.5
7,915	+				-0.2
7,918	-				-0.3
7,921	+				-0.4
7,923	-				+0.9
7,923	-				+1.2
7,923	-				-0.9
7,923	-				-0.4
7,923	-				-0.4
7,923	-				-0.2
7,923	-				-0.1
7,923	-				-0.7
7,923	-				-0.9
7,923	-				-0.1
7,923	-				-0.4
7,923	-				-0.1
7,923	-				-0.0
7,923	-				-1.2
7,923	-				+0.2
7,923	-				+0.1
7,923	-				-1.3
7,923	-				-0.5
7,923	-				+0.2
7,923	-				-0.2
7,924	-				-0.4
7,926	+				-0.3
7,929	-				-1.1
7,931	+				-0.4
7,931	+				+0.2
7,931	+				-0.3
7,931	+				-0.1
7,931	+				-0.3
7,934	-				+0.2
7,934	-				-0.5
7,934	-				-0.0
7,938	-				-0.6
7,939	-				-1.5
7,939	-				-0.3
7,939	-				-0.3
7,939	-				-0.3
7,946	-				+0.1
7,972	-				-0.1
8,011	+				-0.2
8,019	-				+0.2
8,048	-				-0.6
8,080	-				-0.0
8,080	-				+0.1
8,115	+				-0.1
8,129	+				+0.3
8,159	+				-0.8
8,159	+				-0.1
8,159	+				+0.0
8,166	+				+0.1
8,166	+				-0.0
8,166	+				-0.8
8,166	+				-0.8
8,166	+				-0.2
8,174	+				+0.4
8,174	-				-0.5
8,174	-				-0.1
8,174	-				+0.1
8,174	-				+0.1
8,174	-				-0.4
8,174	-				-1.0
8,174	-				-0.3
8,174	-				+0.3
8,174	-				-0.0
8,174	-				-0.1
8,174	-				+0.3
8,174	-				+1.3
8,174	-				-1.7
8,174	-				-0.2
8,204	+				-0.2
8,212	-				+0.0
8,213	-				+0.2
8,213	-				+0.1
8,213	-				-0.2
8,219	-				-0.5
8,225	+				+0.0
8,225	+				-0.5
8,225	+				-1.3
8,225	+				-0.5
8,225	+				-0.4
8,233	-				-0.9
8,233	-				-0.4
8,233	-				-0.4
8,233	-				+0.6
8,239	-				+0.2
8,239	-				-0.7
8,245	-				+1.6
8,311	+				-0.9
8,311	+				+0.6
8,311	+				+0.9
8,311	+				-0.6
8,311	+				-0.5
8,312	+				+1.1
8,317	+				-0.7
8,317	+				+0.2
8,317	+				-0.2
8,317	+				-0.1
8,317	+				-0.1
8,317	+				+1.1
8,319	-				-0.3
8,319	-				+0.7
8,320	+				-0.3
8,320	+				+0.8
8,320	+				+0.1
8,322	+				-0.0
8,322	+				-0.2
8,322	+				-0.1
8,322	+				-0.4
8,325	-				+0.1
8,325	-				-0.4
8,325	-				-0.1
8,325	-				+1.1
8,330	-				-0.5
8,330	-				-0.3
8,330	-				-0.4
8,330	-				-0.2
8,334	+				-0.7
8,341	-				-0.1
8,356	-				-0.1
8,356	-				-1.4
8,401	+				+0.1
8,409	-				+0.2
8,410	-				+0.3
8,420	-				+0.7
8,466	+				-0.6
8,469	+				-0.7
8,471	+				-0.1
8,476	+				-0.1
8,479	-				+0.5
8,484	-				-0.5
8,484	-				+0.1
8,484	-				-0.1
8,488	+				+0.4
8,512	+				+0.1
8,520	-				-0.6
8,520	-				-0.2
8,520	-				-0.9
8,520	-				-0.7
8,526	-				-0.4
8,535	-				-1.1
8,542	-				-0.1
8,549	+				-0.7
8,551	+				+0.5
8,553	-				+0.1
8,557	-				+0.3
8,567	-				-0.9
8,585	+				-0.8
8,616	+				+0.5
8,619	+				+0.4
8,621	+				-0.4
8,621	+				-0.4
8,623	-				-0.1
8,626	+				-0.7
8,627	-				-0.0
8,628	-				+0.1
8,628	-				-0.8
8,629	-				-1.1
8,631	+				-0.7
8,642	+				+0.0
8,643	-				+0.3
8,652	-				-0.4
8,655	+				+0.2
8,655	+				-0.4
8,657	+				-0.1
8,667	-				-1.8
8,673	+				-0.2
8,680	-				-0.6
8,727	+				-0.2
8,727	+				+0.8
8,734	+				-0.4
8,734	+				-0.7
8,735	+				-0.0
8,742	+				-0.1
8,742	+				+0.1
8,744	-				+0.2
8,750	-				-1.1
8,750	-				+0.3
8,750	-				+0.2
8,750	-				+1.3
8,750	-				+0.2
8,751	+				+0.4
8,752	-				+0.9
8,752	-				-1.3
8,759	-				+1.3