Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3183

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
3,346,089	+		Dshi_3182	0.33	-0.4
3,346,102	+		Dshi_3182	0.34	+0.6
3,346,113	+		Dshi_3182	0.35	-0.5
3,346,144	-		Dshi_3182	0.38	+0.1
3,346,163	-		Dshi_3182	0.39	-1.4
3,346,362	+		Dshi_3182	0.56	-0.1
3,346,389	+		Dshi_3182	0.58	+0.2
3,346,412	+		Dshi_3182	0.60	+0.7
3,346,430	-		Dshi_3182	0.62	+0.1
3,346,489	+		Dshi_3182	0.66	-1.4
3,346,497	-		Dshi_3182	0.67	-0.7
3,346,504	-		Dshi_3182	0.68	+0.2
3,346,547	+		Dshi_3182	0.71	-0.7
3,346,590	-		Dshi_3182	0.75	+1.4
3,346,663	-		Dshi_3182	0.81	+0.3
3,346,714	-		Dshi_3182	0.85	+0.2
3,346,776	-				-1.1
3,346,785	-				-0.5
3,346,805	-				+0.2
3,346,882	+				-0.8
3,346,960	+				+0.9
3,346,963	-				+1.2
3,346,965	+				+0.4
3,346,966	+				+0.1
3,346,974	-				-0.2
3,346,984	-				+0.0
3,346,994	-				+0.2
3,347,026	-				+0.2
3,347,076	+		Dshi_3183	0.17	+1.5
3,347,110	+		Dshi_3183	0.25	-0.6
3,347,110	+		Dshi_3183	0.25	-1.6
3,347,110	+		Dshi_3183	0.25	-0.9
3,347,112	+		Dshi_3183	0.25	-1.1
3,347,118	-		Dshi_3183	0.27	-0.3
3,347,118	-		Dshi_3183	0.27	+0.9
3,347,118	-		Dshi_3183	0.27	+0.4
3,347,121	+		Dshi_3183	0.27	-0.1
3,347,132	-		Dshi_3183	0.30	-0.8
3,347,155	-		Dshi_3183	0.35	-0.7
3,347,155	-		Dshi_3183	0.35	-0.1
3,347,248	-		Dshi_3183	0.55	-1.0
3,347,302	+		Dshi_3183	0.67	-0.6
3,347,338	+		Dshi_3183	0.75	+0.9
3,347,362	-		Dshi_3183	0.81	-0.0
3,347,369	-		Dshi_3183	0.82	-0.9
3,347,417	+				+0.9
3,347,425	-				-0.3
3,347,443	+				-0.2
3,347,443	+				-0.0
3,347,451	-				-0.3
3,347,453	+				+0.4
3,347,453	+				+0.5
3,347,461	-				+0.9
3,347,516	-				-0.1
3,347,517	-				-0.3
3,347,559	+				-0.4
3,347,571	-				+0.0
3,347,605	-		Dshi_3184	0.10	+0.5
3,347,680	+		Dshi_3184	0.16	+1.4
3,347,728	-		Dshi_3184	0.19	+0.3
3,347,730	-		Dshi_3184	0.19	+0.5
3,347,733	-		Dshi_3184	0.20	+1.2
3,347,752	-		Dshi_3184	0.21	+0.4
3,347,763	-		Dshi_3184	0.22	-0.2
3,347,763	-		Dshi_3184	0.22	-0.7
3,347,780	+		Dshi_3184	0.23	-2.1
3,347,816	+		Dshi_3184	0.26	+2.4
3,347,818	-		Dshi_3184	0.26	-0.1
3,347,849	+		Dshi_3184	0.28	+1.2
3,347,849	+		Dshi_3184	0.28	+0.0
3,347,897	+		Dshi_3184	0.31	-0.9
3,347,916	+		Dshi_3184	0.33	-0.8
3,348,032	-		Dshi_3184	0.41	+0.1
3,348,037	+		Dshi_3184	0.42	-0.4
3,348,037	-		Dshi_3184	0.42	-0.1
3,348,050	+		Dshi_3184	0.43	-0.1
3,348,052	-		Dshi_3184	0.43	-0.2
3,348,052	-		Dshi_3184	0.43	+0.4
3,348,071	+		Dshi_3184	0.44	-0.6
3,348,071	+		Dshi_3184	0.44	-0.7
3,348,101	+		Dshi_3184	0.46	+0.2
3,348,102	-		Dshi_3184	0.46	-0.4
3,348,129	-		Dshi_3184	0.48	+0.3
3,348,170	+		Dshi_3184	0.51	-0.1
3,348,170	+		Dshi_3184	0.51	+0.2
3,348,170	+		Dshi_3184	0.51	+0.2
3,348,178	-		Dshi_3184	0.52	-0.7
3,348,180	+				+2.5
3,348,264	-		Dshi_3184	0.58	+0.0
3,348,280	+		Dshi_3184	0.59	+0.1
3,348,313	-		Dshi_3184	0.62	-0.1
3,348,340	-		Dshi_3184	0.64	-0.6
3,348,364	-		Dshi_3184	0.65	-0.1
3,348,416	+		Dshi_3184	0.69	+0.5
3,348,428	+		Dshi_3184	0.70	+0.4
3,348,449	+		Dshi_3184	0.71	-1.1