Experiment: phosphite 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3721 and Pf6N2E2_3722 overlap by 4 nucleotides Pf6N2E2_3722 and Pf6N2E2_3723 overlap by 14 nucleotides
Pf6N2E2_3721 - FIG021862: membrane protein, exporter, at 4,333,821 to 4,336,139
_3721
Pf6N2E2_3722 - FIG064705: cation/hydrogen antiporter, at 4,336,136 to 4,337,293
_3722
Pf6N2E2_3723 - FIG022199: FAD-binding protein, at 4,337,280 to 4,338,527
_3723
Position (kb)
4336
4337
4338 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4335.336 kb on + strand, within Pf6N2E2_3721 at 4335.336 kb on + strand, within Pf6N2E2_3721 at 4335.337 kb on - strand, within Pf6N2E2_3721 at 4335.478 kb on + strand, within Pf6N2E2_3721 at 4335.478 kb on + strand, within Pf6N2E2_3721 at 4335.479 kb on - strand, within Pf6N2E2_3721 at 4335.479 kb on - strand, within Pf6N2E2_3721 at 4335.479 kb on - strand, within Pf6N2E2_3721 at 4335.649 kb on + strand, within Pf6N2E2_3721 at 4335.650 kb on - strand, within Pf6N2E2_3721 at 4335.650 kb on - strand, within Pf6N2E2_3721 at 4335.909 kb on + strand at 4336.035 kb on - strand at 4336.035 kb on - strand at 4336.268 kb on + strand, within Pf6N2E2_3722 at 4336.269 kb on - strand, within Pf6N2E2_3722 at 4336.269 kb on - strand, within Pf6N2E2_3722 at 4336.269 kb on - strand, within Pf6N2E2_3722 at 4336.341 kb on - strand, within Pf6N2E2_3722 at 4336.553 kb on + strand, within Pf6N2E2_3722 at 4336.553 kb on + strand, within Pf6N2E2_3722 at 4336.553 kb on + strand, within Pf6N2E2_3722 at 4336.553 kb on + strand, within Pf6N2E2_3722 at 4336.553 kb on + strand, within Pf6N2E2_3722 at 4336.553 kb on + strand, within Pf6N2E2_3722 at 4336.553 kb on + strand, within Pf6N2E2_3722 at 4336.554 kb on - strand, within Pf6N2E2_3722 at 4336.554 kb on - strand, within Pf6N2E2_3722 at 4336.554 kb on - strand, within Pf6N2E2_3722 at 4336.554 kb on - strand, within Pf6N2E2_3722 at 4336.554 kb on - strand, within Pf6N2E2_3722 at 4336.554 kb on - strand, within Pf6N2E2_3722 at 4336.554 kb on - strand, within Pf6N2E2_3722 at 4336.554 kb on - strand, within Pf6N2E2_3722 at 4336.560 kb on - strand, within Pf6N2E2_3722 at 4336.560 kb on - strand, within Pf6N2E2_3722 at 4336.754 kb on + strand, within Pf6N2E2_3722 at 4336.754 kb on + strand, within Pf6N2E2_3722 at 4336.754 kb on + strand, within Pf6N2E2_3722 at 4336.754 kb on + strand, within Pf6N2E2_3722 at 4336.755 kb on - strand, within Pf6N2E2_3722 at 4336.908 kb on - strand, within Pf6N2E2_3722 at 4336.908 kb on - strand, within Pf6N2E2_3722 at 4337.029 kb on - strand, within Pf6N2E2_3722 at 4337.029 kb on - strand, within Pf6N2E2_3722 at 4337.029 kb on - strand, within Pf6N2E2_3722 at 4337.098 kb on + strand, within Pf6N2E2_3722 at 4337.180 kb on + strand at 4337.180 kb on + strand at 4337.180 kb on + strand at 4337.180 kb on + strand at 4337.181 kb on - strand at 4337.181 kb on - strand at 4337.181 kb on - strand at 4337.181 kb on - strand at 4337.245 kb on + strand at 4337.245 kb on + strand at 4337.246 kb on - strand at 4337.246 kb on - strand at 4337.246 kb on - strand at 4337.246 kb on - strand at 4337.246 kb on - strand at 4337.246 kb on - strand at 4337.562 kb on - strand, within Pf6N2E2_3723 at 4337.739 kb on + strand, within Pf6N2E2_3723 at 4337.740 kb on - strand, within Pf6N2E2_3723
Per-strain Table
Position Strand Gene LocusTag Fraction phosphite 0.25 M remove 4,335,336 + Pf6N2E2_3721 0.65 +0.0 4,335,336 + Pf6N2E2_3721 0.65 +0.3 4,335,337 - Pf6N2E2_3721 0.65 +0.6 4,335,478 + Pf6N2E2_3721 0.71 -1.1 4,335,478 + Pf6N2E2_3721 0.71 +0.2 4,335,479 - Pf6N2E2_3721 0.71 +1.8 4,335,479 - Pf6N2E2_3721 0.71 +1.0 4,335,479 - Pf6N2E2_3721 0.71 +0.4 4,335,649 + Pf6N2E2_3721 0.79 -1.6 4,335,650 - Pf6N2E2_3721 0.79 +0.7 4,335,650 - Pf6N2E2_3721 0.79 +0.2 4,335,909 + -0.3 4,336,035 - -0.7 4,336,035 - +1.1 4,336,268 + Pf6N2E2_3722 0.11 +0.7 4,336,269 - Pf6N2E2_3722 0.11 +1.1 4,336,269 - Pf6N2E2_3722 0.11 +0.1 4,336,269 - Pf6N2E2_3722 0.11 -0.2 4,336,341 - Pf6N2E2_3722 0.18 +0.6 4,336,553 + Pf6N2E2_3722 0.36 +0.2 4,336,553 + Pf6N2E2_3722 0.36 +2.3 4,336,553 + Pf6N2E2_3722 0.36 +1.3 4,336,553 + Pf6N2E2_3722 0.36 +0.5 4,336,553 + Pf6N2E2_3722 0.36 -0.4 4,336,553 + Pf6N2E2_3722 0.36 -0.8 4,336,553 + Pf6N2E2_3722 0.36 -0.2 4,336,554 - Pf6N2E2_3722 0.36 +0.7 4,336,554 - Pf6N2E2_3722 0.36 -0.4 4,336,554 - Pf6N2E2_3722 0.36 +0.7 4,336,554 - Pf6N2E2_3722 0.36 +1.3 4,336,554 - Pf6N2E2_3722 0.36 -0.3 4,336,554 - Pf6N2E2_3722 0.36 -0.2 4,336,554 - Pf6N2E2_3722 0.36 -1.3 4,336,554 - Pf6N2E2_3722 0.36 +0.5 4,336,560 - Pf6N2E2_3722 0.37 -0.2 4,336,560 - Pf6N2E2_3722 0.37 +0.2 4,336,754 + Pf6N2E2_3722 0.53 -0.4 4,336,754 + Pf6N2E2_3722 0.53 +1.2 4,336,754 + Pf6N2E2_3722 0.53 +0.2 4,336,754 + Pf6N2E2_3722 0.53 -0.5 4,336,755 - Pf6N2E2_3722 0.53 +1.4 4,336,908 - Pf6N2E2_3722 0.67 +0.7 4,336,908 - Pf6N2E2_3722 0.67 -0.2 4,337,029 - Pf6N2E2_3722 0.77 +1.4 4,337,029 - Pf6N2E2_3722 0.77 +0.7 4,337,029 - Pf6N2E2_3722 0.77 +1.2 4,337,098 + Pf6N2E2_3722 0.83 +0.4 4,337,180 + -0.7 4,337,180 + -2.8 4,337,180 + +0.6 4,337,180 + +1.7 4,337,181 - +0.0 4,337,181 - +0.1 4,337,181 - +0.6 4,337,181 - +0.2 4,337,245 + +0.7 4,337,245 + +0.4 4,337,246 - -0.7 4,337,246 - +1.9 4,337,246 - -1.0 4,337,246 - -0.4 4,337,246 - +0.3 4,337,246 - -1.6 4,337,562 - Pf6N2E2_3723 0.23 +1.6 4,337,739 + Pf6N2E2_3723 0.37 +0.4 4,337,740 - Pf6N2E2_3723 0.37 -0.1
Or see this region's nucleotide sequence