Experiment: phosphite 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1709 and Pf6N2E2_1710 are separated by 43 nucleotides Pf6N2E2_1710 and Pf6N2E2_1711 are separated by 116 nucleotides Pf6N2E2_1711 and Pf6N2E2_1712 overlap by 14 nucleotides
Pf6N2E2_1709 - multidrug resistance transporter, Bcr/CflA family, at 2,017,318 to 2,018,538
_1709
Pf6N2E2_1710 - FIG00953587: hypothetical protein, at 2,018,582 to 2,019,856
_1710
Pf6N2E2_1711 - 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9), at 2,019,973 to 2,020,857
_1711
Pf6N2E2_1712 - Permease of the drug/metabolite transporter (DMT) superfamily, at 2,020,844 to 2,021,749
_1712
Position (kb)
2018
2019
2020 Strain fitness (log2 ratio)
-1
0
1
2 at 2017.904 kb on + strand, within Pf6N2E2_1709 at 2017.904 kb on + strand, within Pf6N2E2_1709 at 2017.976 kb on - strand, within Pf6N2E2_1709 at 2018.120 kb on - strand, within Pf6N2E2_1709 at 2018.120 kb on - strand, within Pf6N2E2_1709 at 2018.281 kb on + strand, within Pf6N2E2_1709 at 2018.281 kb on + strand, within Pf6N2E2_1709 at 2018.675 kb on + strand at 2018.676 kb on - strand at 2018.752 kb on - strand, within Pf6N2E2_1710 at 2019.029 kb on + strand, within Pf6N2E2_1710 at 2019.029 kb on + strand, within Pf6N2E2_1710 at 2019.029 kb on + strand, within Pf6N2E2_1710 at 2019.029 kb on + strand, within Pf6N2E2_1710 at 2019.030 kb on - strand, within Pf6N2E2_1710 at 2019.030 kb on - strand, within Pf6N2E2_1710 at 2019.030 kb on - strand, within Pf6N2E2_1710 at 2019.030 kb on - strand, within Pf6N2E2_1710 at 2019.030 kb on - strand, within Pf6N2E2_1710 at 2019.030 kb on - strand, within Pf6N2E2_1710 at 2019.030 kb on - strand, within Pf6N2E2_1710 at 2019.030 kb on - strand, within Pf6N2E2_1710 at 2019.031 kb on + strand, within Pf6N2E2_1710 at 2019.105 kb on + strand, within Pf6N2E2_1710 at 2019.106 kb on - strand, within Pf6N2E2_1710 at 2019.123 kb on + strand, within Pf6N2E2_1710 at 2019.363 kb on + strand, within Pf6N2E2_1710 at 2019.364 kb on - strand, within Pf6N2E2_1710 at 2019.364 kb on - strand, within Pf6N2E2_1710 at 2019.442 kb on - strand, within Pf6N2E2_1710 at 2019.576 kb on + strand, within Pf6N2E2_1710 at 2019.577 kb on - strand, within Pf6N2E2_1710 at 2019.751 kb on - strand at 2019.839 kb on - strand at 2019.847 kb on + strand at 2019.847 kb on + strand at 2020.037 kb on + strand at 2020.123 kb on + strand, within Pf6N2E2_1711 at 2020.123 kb on + strand, within Pf6N2E2_1711 at 2020.124 kb on - strand, within Pf6N2E2_1711 at 2020.399 kb on + strand, within Pf6N2E2_1711 at 2020.472 kb on + strand, within Pf6N2E2_1711 at 2020.473 kb on - strand, within Pf6N2E2_1711 at 2020.473 kb on - strand, within Pf6N2E2_1711
Per-strain Table
Position Strand Gene LocusTag Fraction phosphite 0.25 M remove 2,017,904 + Pf6N2E2_1709 0.48 -1.1 2,017,904 + Pf6N2E2_1709 0.48 +0.2 2,017,976 - Pf6N2E2_1709 0.54 -0.7 2,018,120 - Pf6N2E2_1709 0.66 +0.7 2,018,120 - Pf6N2E2_1709 0.66 +0.3 2,018,281 + Pf6N2E2_1709 0.79 +0.2 2,018,281 + Pf6N2E2_1709 0.79 -0.4 2,018,675 + -0.4 2,018,676 - -0.3 2,018,752 - Pf6N2E2_1710 0.13 -0.3 2,019,029 + Pf6N2E2_1710 0.35 -0.8 2,019,029 + Pf6N2E2_1710 0.35 -0.4 2,019,029 + Pf6N2E2_1710 0.35 +1.5 2,019,029 + Pf6N2E2_1710 0.35 +1.2 2,019,030 - Pf6N2E2_1710 0.35 +1.0 2,019,030 - Pf6N2E2_1710 0.35 -0.5 2,019,030 - Pf6N2E2_1710 0.35 -0.8 2,019,030 - Pf6N2E2_1710 0.35 -1.2 2,019,030 - Pf6N2E2_1710 0.35 -1.1 2,019,030 - Pf6N2E2_1710 0.35 +2.3 2,019,030 - Pf6N2E2_1710 0.35 -0.2 2,019,030 - Pf6N2E2_1710 0.35 +1.6 2,019,031 + Pf6N2E2_1710 0.35 -0.4 2,019,105 + Pf6N2E2_1710 0.41 -0.3 2,019,106 - Pf6N2E2_1710 0.41 +1.1 2,019,123 + Pf6N2E2_1710 0.42 -0.0 2,019,363 + Pf6N2E2_1710 0.61 -1.1 2,019,364 - Pf6N2E2_1710 0.61 -0.4 2,019,364 - Pf6N2E2_1710 0.61 +0.3 2,019,442 - Pf6N2E2_1710 0.67 -0.4 2,019,576 + Pf6N2E2_1710 0.78 -1.5 2,019,577 - Pf6N2E2_1710 0.78 -1.1 2,019,751 - -0.1 2,019,839 - +1.1 2,019,847 + -0.9 2,019,847 + +1.8 2,020,037 + -0.8 2,020,123 + Pf6N2E2_1711 0.17 +0.0 2,020,123 + Pf6N2E2_1711 0.17 +0.0 2,020,124 - Pf6N2E2_1711 0.17 +0.6 2,020,399 + Pf6N2E2_1711 0.48 +0.0 2,020,472 + Pf6N2E2_1711 0.56 -1.4 2,020,473 - Pf6N2E2_1711 0.56 +0.5 2,020,473 - Pf6N2E2_1711 0.56 +0.6
Or see this region's nucleotide sequence