Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06470 and H281DRAFT_06471 are separated by 372 nucleotides H281DRAFT_06471 and H281DRAFT_06472 are separated by 585 nucleotides
H281DRAFT_06470: H281DRAFT_06470 - Rhodanese-related sulfurtransferase, at 5,912 to 7,513
_06470
H281DRAFT_06471: H281DRAFT_06471 - sulfonate transport system substrate-binding protein, at 7,886 to 8,872
_06471
H281DRAFT_06472: H281DRAFT_06472 - hypothetical protein, at 9,458 to 10,009
_06472
Position (kb) 7
8
9 Strain fitness (log2 ratio) -1
0
1
2 at 6.966 kb on - strand, within H281DRAFT_06470 at 7.134 kb on - strand, within H281DRAFT_06470 at 7.134 kb on - strand, within H281DRAFT_06470 at 7.134 kb on - strand, within H281DRAFT_06470 at 7.458 kb on - strand at 7.836 kb on + strand at 8.093 kb on + strand, within H281DRAFT_06471 at 8.093 kb on + strand, within H281DRAFT_06471 at 8.094 kb on - strand, within H281DRAFT_06471 at 8.351 kb on + strand, within H281DRAFT_06471 at 8.484 kb on - strand, within H281DRAFT_06471 at 8.798 kb on + strand at 8.799 kb on - strand at 8.949 kb on + strand at 8.990 kb on - strand at 9.114 kb on + strand at 9.115 kb on - strand at 9.373 kb on + strand at 9.672 kb on - strand, within H281DRAFT_06472 at 9.674 kb on - strand, within H281DRAFT_06472 at 9.724 kb on + strand, within H281DRAFT_06472 at 9.725 kb on - strand, within H281DRAFT_06472 at 9.729 kb on - strand, within H281DRAFT_06472 at 9.729 kb on - strand, within H281DRAFT_06472 at 9.755 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 6,966 - H281DRAFT_06470 0.66 +0.4 7,134 - H281DRAFT_06470 0.76 +0.2 7,134 - H281DRAFT_06470 0.76 +0.2 7,134 - H281DRAFT_06470 0.76 +1.0 7,458 - -0.3 7,836 + -0.3 8,093 + H281DRAFT_06471 0.21 -1.7 8,093 + H281DRAFT_06471 0.21 +0.7 8,094 - H281DRAFT_06471 0.21 +0.5 8,351 + H281DRAFT_06471 0.47 +1.1 8,484 - H281DRAFT_06471 0.61 +2.0 8,798 + -0.1 8,799 - +0.7 8,949 + -0.7 8,990 - -0.1 9,114 + +0.3 9,115 - -0.1 9,373 + +0.0 9,672 - H281DRAFT_06472 0.39 -0.1 9,674 - H281DRAFT_06472 0.39 -1.1 9,724 + H281DRAFT_06472 0.48 +1.1 9,725 - H281DRAFT_06472 0.48 -0.7 9,729 - H281DRAFT_06472 0.49 -0.3 9,729 - H281DRAFT_06472 0.49 +0.8 9,755 - +2.3
Or see this region's nucleotide sequence