Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06176 and H281DRAFT_06177 are separated by 75 nucleotides H281DRAFT_06177 and H281DRAFT_06178 are separated by 31 nucleotides H281DRAFT_06178 and H281DRAFT_06179 are separated by 55 nucleotides H281DRAFT_06179 and H281DRAFT_06180 are separated by 84 nucleotides
H281DRAFT_06176: H281DRAFT_06176 - exonuclease SbcC, at 67,116 to 69,437
_06176
H281DRAFT_06177: H281DRAFT_06177 - hypothetical protein, at 69,513 to 69,698
_06177
H281DRAFT_06178: H281DRAFT_06178 - hypothetical protein, at 69,730 to 69,936
_06178
H281DRAFT_06179: H281DRAFT_06179 - hypothetical protein, at 69,992 to 70,210
_06179
H281DRAFT_06180: H281DRAFT_06180 - hypothetical protein, at 70,295 to 70,678
_06180
Position (kb) 69
70 Strain fitness (log2 ratio) -2
-1
0
1
2 at 69.252 kb on + strand at 69.253 kb on - strand at 69.534 kb on + strand, within H281DRAFT_06177 at 69.534 kb on + strand, within H281DRAFT_06177 at 69.534 kb on + strand, within H281DRAFT_06177 at 69.534 kb on + strand, within H281DRAFT_06177 at 69.534 kb on + strand, within H281DRAFT_06177 at 69.534 kb on + strand, within H281DRAFT_06177 at 69.535 kb on - strand, within H281DRAFT_06177 at 69.599 kb on + strand, within H281DRAFT_06177 at 69.603 kb on + strand, within H281DRAFT_06177 at 69.603 kb on + strand, within H281DRAFT_06177 at 69.603 kb on + strand, within H281DRAFT_06177 at 69.604 kb on - strand, within H281DRAFT_06177 at 69.604 kb on - strand, within H281DRAFT_06177 at 69.604 kb on - strand, within H281DRAFT_06177 at 69.723 kb on + strand at 69.765 kb on + strand, within H281DRAFT_06178 at 70.309 kb on + strand at 70.470 kb on + strand at 70.541 kb on + strand, within H281DRAFT_06180 at 70.542 kb on - strand, within H281DRAFT_06180 at 70.557 kb on + strand, within H281DRAFT_06180 at 70.561 kb on + strand, within H281DRAFT_06180 at 70.654 kb on + strand at 70.654 kb on + strand at 70.677 kb on - strand at 70.695 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 69,252 + +0.2 69,253 - +0.4 69,534 + H281DRAFT_06177 0.11 +0.5 69,534 + H281DRAFT_06177 0.11 +1.3 69,534 + H281DRAFT_06177 0.11 +0.9 69,534 + H281DRAFT_06177 0.11 +0.8 69,534 + H281DRAFT_06177 0.11 +1.0 69,534 + H281DRAFT_06177 0.11 +0.8 69,535 - H281DRAFT_06177 0.12 -0.2 69,599 + H281DRAFT_06177 0.46 +1.9 69,603 + H281DRAFT_06177 0.48 +1.5 69,603 + H281DRAFT_06177 0.48 +0.8 69,603 + H281DRAFT_06177 0.48 +1.0 69,604 - H281DRAFT_06177 0.49 -0.7 69,604 - H281DRAFT_06177 0.49 -0.4 69,604 - H281DRAFT_06177 0.49 -0.1 69,723 + +1.3 69,765 + H281DRAFT_06178 0.17 -0.1 70,309 + -0.4 70,470 + +2.2 70,541 + H281DRAFT_06180 0.64 +0.5 70,542 - H281DRAFT_06180 0.64 -0.8 70,557 + H281DRAFT_06180 0.68 -0.4 70,561 + H281DRAFT_06180 0.69 +0.6 70,654 + +0.1 70,654 + -2.2 70,677 - -0.3 70,695 + -0.3
Or see this region's nucleotide sequence