Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05624 and H281DRAFT_05625 are separated by 226 nucleotides H281DRAFT_05625 and H281DRAFT_05626 overlap by 4 nucleotides
H281DRAFT_05624: H281DRAFT_05624 - protein-tyrosine phosphatase, at 50,669 to 51,613
_05624
H281DRAFT_05625: H281DRAFT_05625 - two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ, at 51,840 to 53,165
_05625
H281DRAFT_05626: H281DRAFT_05626 - two component transcriptional regulator, winged helix family, at 53,162 to 53,902
_05626
Position (kb) 51
52
53
54 Strain fitness (log2 ratio) -1
0
1
2 at 51.079 kb on + strand, within H281DRAFT_05624 at 51.080 kb on - strand, within H281DRAFT_05624 at 51.099 kb on + strand, within H281DRAFT_05624 at 51.117 kb on + strand, within H281DRAFT_05624 at 51.117 kb on + strand, within H281DRAFT_05624 at 51.118 kb on - strand, within H281DRAFT_05624 at 51.200 kb on + strand, within H281DRAFT_05624 at 51.200 kb on + strand, within H281DRAFT_05624 at 51.201 kb on - strand, within H281DRAFT_05624 at 51.201 kb on - strand, within H281DRAFT_05624 at 51.204 kb on + strand, within H281DRAFT_05624 at 51.205 kb on - strand, within H281DRAFT_05624 at 51.230 kb on + strand, within H281DRAFT_05624 at 51.244 kb on - strand, within H281DRAFT_05624 at 51.340 kb on + strand, within H281DRAFT_05624 at 51.341 kb on - strand, within H281DRAFT_05624 at 51.341 kb on - strand, within H281DRAFT_05624 at 51.371 kb on + strand, within H281DRAFT_05624 at 51.371 kb on + strand, within H281DRAFT_05624 at 51.372 kb on - strand, within H281DRAFT_05624 at 51.372 kb on - strand, within H281DRAFT_05624 at 51.492 kb on - strand, within H281DRAFT_05624 at 51.545 kb on + strand at 51.546 kb on - strand at 51.751 kb on + strand at 51.751 kb on + strand at 51.751 kb on + strand at 51.751 kb on + strand at 51.752 kb on - strand at 51.753 kb on + strand at 51.753 kb on + strand at 51.753 kb on + strand at 51.773 kb on + strand at 51.795 kb on + strand at 51.841 kb on + strand at 51.875 kb on + strand at 51.875 kb on + strand at 51.875 kb on + strand at 51.879 kb on + strand at 51.879 kb on + strand at 51.879 kb on + strand at 51.880 kb on - strand at 51.880 kb on - strand at 51.880 kb on - strand at 51.880 kb on - strand at 51.880 kb on - strand at 51.880 kb on - strand at 51.910 kb on - strand at 52.082 kb on - strand, within H281DRAFT_05625 at 53.250 kb on + strand, within H281DRAFT_05626 at 53.250 kb on + strand, within H281DRAFT_05626 at 53.250 kb on + strand, within H281DRAFT_05626 at 53.250 kb on + strand, within H281DRAFT_05626 at 53.250 kb on + strand, within H281DRAFT_05626 at 53.251 kb on - strand, within H281DRAFT_05626 at 53.380 kb on + strand, within H281DRAFT_05626 at 53.380 kb on + strand, within H281DRAFT_05626 at 53.382 kb on + strand, within H281DRAFT_05626 at 53.383 kb on - strand, within H281DRAFT_05626 at 53.383 kb on - strand, within H281DRAFT_05626 at 53.383 kb on - strand, within H281DRAFT_05626 at 53.497 kb on + strand, within H281DRAFT_05626 at 53.497 kb on + strand, within H281DRAFT_05626 at 53.498 kb on - strand, within H281DRAFT_05626 at 53.498 kb on - strand, within H281DRAFT_05626 at 53.499 kb on + strand, within H281DRAFT_05626 at 53.499 kb on + strand, within H281DRAFT_05626 at 53.634 kb on - strand, within H281DRAFT_05626 at 53.914 kb on - strand at 53.995 kb on + strand at 54.023 kb on + strand at 54.023 kb on + strand at 54.023 kb on + strand at 54.024 kb on - strand at 54.024 kb on - strand at 54.024 kb on - strand at 54.039 kb on + strand at 54.039 kb on + strand at 54.039 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 51,079 + H281DRAFT_05624 0.43 +0.1 51,080 - H281DRAFT_05624 0.43 +0.4 51,099 + H281DRAFT_05624 0.46 -1.2 51,117 + H281DRAFT_05624 0.47 -0.3 51,117 + H281DRAFT_05624 0.47 -1.1 51,118 - H281DRAFT_05624 0.48 +0.1 51,200 + H281DRAFT_05624 0.56 -0.3 51,200 + H281DRAFT_05624 0.56 +0.1 51,201 - H281DRAFT_05624 0.56 -0.5 51,201 - H281DRAFT_05624 0.56 +0.1 51,204 + H281DRAFT_05624 0.57 -0.6 51,205 - H281DRAFT_05624 0.57 +0.3 51,230 + H281DRAFT_05624 0.59 +0.6 51,244 - H281DRAFT_05624 0.61 +0.1 51,340 + H281DRAFT_05624 0.71 -0.2 51,341 - H281DRAFT_05624 0.71 +0.6 51,341 - H281DRAFT_05624 0.71 -0.5 51,371 + H281DRAFT_05624 0.74 -0.0 51,371 + H281DRAFT_05624 0.74 +0.1 51,372 - H281DRAFT_05624 0.74 +0.0 51,372 - H281DRAFT_05624 0.74 -0.3 51,492 - H281DRAFT_05624 0.87 +0.5 51,545 + +0.3 51,546 - +0.1 51,751 + -1.3 51,751 + -0.9 51,751 + -0.4 51,751 + -0.2 51,752 - +0.7 51,753 + -0.2 51,753 + +1.4 51,753 + +0.5 51,773 + +0.0 51,795 + +0.0 51,841 + +0.2 51,875 + +0.2 51,875 + +0.0 51,875 + +0.5 51,879 + +0.5 51,879 + +0.3 51,879 + +0.2 51,880 - -0.7 51,880 - -0.1 51,880 - -0.1 51,880 - -0.1 51,880 - +0.1 51,880 - +0.5 51,910 - -0.1 52,082 - H281DRAFT_05625 0.18 +0.7 53,250 + H281DRAFT_05626 0.12 +0.7 53,250 + H281DRAFT_05626 0.12 -0.0 53,250 + H281DRAFT_05626 0.12 +2.3 53,250 + H281DRAFT_05626 0.12 +0.2 53,250 + H281DRAFT_05626 0.12 +0.9 53,251 - H281DRAFT_05626 0.12 +0.3 53,380 + H281DRAFT_05626 0.29 +0.5 53,380 + H281DRAFT_05626 0.29 -0.6 53,382 + H281DRAFT_05626 0.30 +0.4 53,383 - H281DRAFT_05626 0.30 +0.0 53,383 - H281DRAFT_05626 0.30 +0.0 53,383 - H281DRAFT_05626 0.30 +1.4 53,497 + H281DRAFT_05626 0.45 +0.1 53,497 + H281DRAFT_05626 0.45 +1.0 53,498 - H281DRAFT_05626 0.45 -0.4 53,498 - H281DRAFT_05626 0.45 +0.9 53,499 + H281DRAFT_05626 0.45 +0.0 53,499 + H281DRAFT_05626 0.45 +1.0 53,634 - H281DRAFT_05626 0.64 -0.2 53,914 - +0.9 53,995 + +0.3 54,023 + -1.0 54,023 + +0.6 54,023 + -0.7 54,024 - -0.1 54,024 - +0.0 54,024 - +0.4 54,039 + -0.0 54,039 + +0.4 54,039 + -0.5
Or see this region's nucleotide sequence