Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05533 and H281DRAFT_05534 are separated by 38 nucleotides H281DRAFT_05534 and H281DRAFT_05535 overlap by 7 nucleotides H281DRAFT_05535 and H281DRAFT_05536 are separated by 8 nucleotides
H281DRAFT_05533: H281DRAFT_05533 - putative spermidine/putrescine transport system substrate-binding protein, at 117,723 to 118,808
_05533
H281DRAFT_05534: H281DRAFT_05534 - Zn-dependent dipeptidase, dipeptidase homolog, at 118,847 to 119,812
_05534
H281DRAFT_05535: H281DRAFT_05535 - YD repeat-containing protein, at 119,806 to 120,549
_05535
H281DRAFT_05536: H281DRAFT_05536 - hypothetical protein, at 120,558 to 122,282
_05536
Position (kb) 118
119
120 Strain fitness (log2 ratio) -2
-1
0
1 at 117.859 kb on + strand, within H281DRAFT_05533 at 117.860 kb on - strand, within H281DRAFT_05533 at 117.860 kb on - strand, within H281DRAFT_05533 at 117.930 kb on - strand, within H281DRAFT_05533 at 117.978 kb on - strand, within H281DRAFT_05533 at 118.443 kb on - strand, within H281DRAFT_05533 at 118.465 kb on - strand, within H281DRAFT_05533 at 118.669 kb on + strand, within H281DRAFT_05533 at 118.670 kb on - strand, within H281DRAFT_05533 at 118.676 kb on + strand, within H281DRAFT_05533 at 118.822 kb on - strand at 119.348 kb on - strand, within H281DRAFT_05534 at 119.485 kb on - strand, within H281DRAFT_05534 at 119.641 kb on + strand, within H281DRAFT_05534 at 119.873 kb on + strand at 119.970 kb on - strand, within H281DRAFT_05535 at 120.147 kb on - strand, within H281DRAFT_05535 at 120.301 kb on - strand, within H281DRAFT_05535 at 120.301 kb on - strand, within H281DRAFT_05535 at 120.505 kb on + strand at 120.721 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 117,859 + H281DRAFT_05533 0.13 +1.4 117,860 - H281DRAFT_05533 0.13 +0.3 117,860 - H281DRAFT_05533 0.13 +0.7 117,930 - H281DRAFT_05533 0.19 -0.1 117,978 - H281DRAFT_05533 0.23 -0.1 118,443 - H281DRAFT_05533 0.66 -2.3 118,465 - H281DRAFT_05533 0.68 -0.5 118,669 + H281DRAFT_05533 0.87 -0.5 118,670 - H281DRAFT_05533 0.87 -0.5 118,676 + H281DRAFT_05533 0.88 -0.9 118,822 - +0.2 119,348 - H281DRAFT_05534 0.52 +1.0 119,485 - H281DRAFT_05534 0.66 -0.7 119,641 + H281DRAFT_05534 0.82 +0.9 119,873 + +0.2 119,970 - H281DRAFT_05535 0.22 +1.0 120,147 - H281DRAFT_05535 0.46 +0.6 120,301 - H281DRAFT_05535 0.67 -1.5 120,301 - H281DRAFT_05535 0.67 -0.1 120,505 + +0.3 120,721 - -0.1
Or see this region's nucleotide sequence