Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03722 and H281DRAFT_03723 are separated by 119 nucleotides H281DRAFT_03723 and H281DRAFT_03724 are separated by 36 nucleotides H281DRAFT_03724 and H281DRAFT_03725 are separated by 9 nucleotides
H281DRAFT_03722: H281DRAFT_03722 - hypothetical protein, at 237,098 to 237,895
_03722
H281DRAFT_03723: H281DRAFT_03723 - transcriptional regulator, AraC family with amidase-like domain, at 238,015 to 238,962
_03723
H281DRAFT_03724: H281DRAFT_03724 - hypothetical protein, at 238,999 to 239,652
_03724
H281DRAFT_03725: H281DRAFT_03725 - hypothetical protein, at 239,662 to 240,882
_03725
Position (kb) 238
239 Strain fitness (log2 ratio) -1
0
1
2
3 at 237.080 kb on - strand at 237.172 kb on - strand at 237.432 kb on + strand, within H281DRAFT_03722 at 237.529 kb on - strand, within H281DRAFT_03722 at 237.608 kb on - strand, within H281DRAFT_03722 at 237.608 kb on - strand, within H281DRAFT_03722 at 237.716 kb on + strand, within H281DRAFT_03722 at 237.973 kb on + strand at 237.974 kb on - strand at 238.166 kb on + strand, within H281DRAFT_03723 at 238.393 kb on + strand, within H281DRAFT_03723 at 239.577 kb on - strand, within H281DRAFT_03724 at 239.619 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 237,080 - +0.0 237,172 - +0.6 237,432 + H281DRAFT_03722 0.42 +0.0 237,529 - H281DRAFT_03722 0.54 -0.4 237,608 - H281DRAFT_03722 0.64 -0.1 237,608 - H281DRAFT_03722 0.64 +0.3 237,716 + H281DRAFT_03722 0.77 +0.9 237,973 + +0.2 237,974 - +0.2 238,166 + H281DRAFT_03723 0.16 +3.1 238,393 + H281DRAFT_03723 0.40 +0.2 239,577 - H281DRAFT_03724 0.88 +0.4 239,619 - +0.4
Or see this region's nucleotide sequence