Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03416 and H281DRAFT_03417 are separated by 464 nucleotides H281DRAFT_03417 and H281DRAFT_03418 are separated by 129 nucleotides
H281DRAFT_03416: H281DRAFT_03416 - filamentous hemagglutinin family N-terminal domain-containing protein, at 487,032 to 489,509
_03416
H281DRAFT_03417: H281DRAFT_03417 - hypothetical protein, at 489,974 to 491,662
_03417
H281DRAFT_03418: H281DRAFT_03418 - 3-hydroxyisobutyrate dehydrogenase, at 491,792 to 492,694
_03418
Position (kb) 489
490
491
492 Strain fitness (log2 ratio) -1
0
1 at 489.370 kb on - strand at 489.536 kb on - strand at 489.590 kb on - strand at 489.637 kb on + strand at 489.871 kb on - strand at 489.874 kb on + strand at 489.875 kb on - strand at 490.025 kb on + strand at 490.026 kb on - strand at 490.027 kb on + strand at 490.028 kb on - strand at 490.350 kb on + strand, within H281DRAFT_03417 at 490.351 kb on - strand, within H281DRAFT_03417 at 490.363 kb on + strand, within H281DRAFT_03417 at 490.367 kb on + strand, within H281DRAFT_03417 at 490.368 kb on - strand, within H281DRAFT_03417 at 490.368 kb on - strand, within H281DRAFT_03417 at 490.434 kb on - strand, within H281DRAFT_03417 at 490.523 kb on + strand, within H281DRAFT_03417 at 490.670 kb on + strand, within H281DRAFT_03417 at 490.671 kb on - strand, within H281DRAFT_03417 at 490.705 kb on + strand, within H281DRAFT_03417 at 491.331 kb on - strand, within H281DRAFT_03417 at 491.331 kb on - strand, within H281DRAFT_03417 at 491.339 kb on + strand, within H281DRAFT_03417 at 491.339 kb on + strand, within H281DRAFT_03417 at 491.404 kb on + strand, within H281DRAFT_03417 at 491.579 kb on + strand at 491.580 kb on - strand at 491.580 kb on - strand at 491.660 kb on + strand at 492.007 kb on - strand, within H281DRAFT_03418 at 492.316 kb on - strand, within H281DRAFT_03418
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 489,370 - +0.1 489,536 - +1.4 489,590 - -0.2 489,637 + +0.2 489,871 - -0.4 489,874 + -0.4 489,875 - -0.1 490,025 + +0.3 490,026 - -0.0 490,027 + -1.3 490,028 - +0.2 490,350 + H281DRAFT_03417 0.22 -0.2 490,351 - H281DRAFT_03417 0.22 +0.0 490,363 + H281DRAFT_03417 0.23 +0.3 490,367 + H281DRAFT_03417 0.23 -0.5 490,368 - H281DRAFT_03417 0.23 -0.0 490,368 - H281DRAFT_03417 0.23 +0.6 490,434 - H281DRAFT_03417 0.27 +0.4 490,523 + H281DRAFT_03417 0.33 +0.0 490,670 + H281DRAFT_03417 0.41 +0.2 490,671 - H281DRAFT_03417 0.41 -0.3 490,705 + H281DRAFT_03417 0.43 +0.5 491,331 - H281DRAFT_03417 0.80 +0.8 491,331 - H281DRAFT_03417 0.80 +0.4 491,339 + H281DRAFT_03417 0.81 +1.2 491,339 + H281DRAFT_03417 0.81 +0.1 491,404 + H281DRAFT_03417 0.85 +0.6 491,579 + -0.0 491,580 - -0.2 491,580 - +0.1 491,660 + +0.4 492,007 - H281DRAFT_03418 0.24 +1.0 492,316 - H281DRAFT_03418 0.58 +0.6
Or see this region's nucleotide sequence